FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003629918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCCCAGGGAACTGGTGATGTTGGGCATAATTTTAGTCCTGGAAGTCTG26.896551724137931No Hit
AGTCCAGCTTCTCGTTGGGATGCTGGAGGATCGCCCGGAGATTGCATATC26.896551724137931No Hit
GAACCTCCCGGGGGCTTTGTAAGCTGAGACTCCATTGTACACCTGGTTAC26.896551724137931No Hit
GGCCCATGGCTCCCCGCCGCGCTGCGGCCGCGGGGAGCCGGTTTGGCCGG26.896551724137931No Hit
GGGTCGCGCACCACGCCGCGGGAATTGTCAGCTCCGACGAGCACCGGCTC26.896551724137931No Hit
GTAAAAGGAGAAAAGAATCATGGGAAAAAACGCGATCGTCGGACAGTCCG13.4482758620689653No Hit
ATCTTGCCATGCACAAAGCCGTGGGCGCTCCACCCGGCGGCCCCCAGCGC13.4482758620689653No Hit
TCCTAGGATGCCCTGGCATCTGTGATCTTTCATACACAACAATCATCTTT13.4482758620689653No Hit
GATATAGACCTCCACGTGAAAACCACATAGCCAAGTCCAGGCAGAATCAT13.4482758620689653No Hit
GGCTTGTTCCCTTTCAGCCAAAGAAAGAGTCCTCCGGCAGGGCGGATGAG13.4482758620689653No Hit
GTTCAGGCGCGTGCTGTTGCTGATGATCTTGCCGTCGCCTTCGACGATCA13.4482758620689653No Hit
TTCCATTCGATGATGATTCCATTCGTTTCCATCCGATGATGATTCCATTC13.4482758620689653No Hit
CTCCTCCACCACCTGGCCGCCGTCCAGGATGGCGACCCGGTCGCAGATGG13.4482758620689653No Hit
GTAAATGGTAGGCATTCTCAGGACTTCTTTCCTTGGTAGCTTAGAGCAGG13.4482758620689653No Hit
CCCCGCCCCGTTTTGGTACACGGTCACGTTCTCCCAGCTGGCCCCGCCGT13.4482758620689653No Hit
CACATGGAGCATGTCTTCTGGGTATAGGAATTTCTTGTCCCTTTTGGCAA13.4482758620689653No Hit
TTGCCGGACTGTTCATTGTCCAAGTTCAGCGTCTGGGACGCCGGTTCCGG13.4482758620689653No Hit
TGGTAAGTGTGCTGTGGACTGCCGAGCTCTGTGCTTCCTCTCTTCGGTTC13.4482758620689653No Hit
GTACAAGGATTTTTAGTAAACCTACTGCAGTGTGCAGCCATCTCCATCAT13.4482758620689653No Hit
CTCAAGATCACACATGGCAGAGCCAGGTCCAGCCCATGCCATCTCTGTCT13.4482758620689653No Hit
GTGCAGACCGAACGGAATGAGCAGTCTGTTGAAAAATGCATACAGTCCGG13.4482758620689653No Hit
ATCTTGCCATGCACAAAGCCGTGGGCGCTCCACCCGGCGGACCCCAGCGC13.4482758620689653No Hit
GACCCACCACTGATTAAGCTGGCTTGTTCTGACACCTACAACAAGGAGTT13.4482758620689653No Hit
AGGAAGTACAAAGGGGTCCAGGCTCTTTCCATGGTGTACTTACCGAAACA13.4482758620689653No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)