FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003629993

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629993
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAA222.22222222222222No Hit
ACACACGGACGATCGGGTCGCAAAGATGTGCTAGTGAACTCCTTAATGGT111.11111111111111No Hit
TTCCAAAAGGACCCTAATCTTATGTGAAAACACCTACTGTGGGGGAACCA111.11111111111111No Hit
GTTCCTTGACGTTCCATTGGGTGACTATTGCAGTGGTTCAGATGTTGTGC111.11111111111111No Hit
TTGCTGCACCTGTTGGGCCAGTTCCCGAGTTGGTGCCAGCACCAAACAAA111.11111111111111No Hit
GGCTCGCCTCGCGGCGGACCGCCCGCCCGCTCCCAAGATCCAACTACGAG111.11111111111111No Hit
GTTGAAGCAGGGGTCCGAGTCGCAGGGTGATGGCAGGGAGTGGCTGGCAT111.11111111111111No Hit
GGGTGGACACTGTGCAGGCTTCAGCTTCCACTCCGGGCAGGATTCAGGCT111.11111111111111No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)