FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003630019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003630019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT32.4No Hit
ATGTACATACATATGTGAGTCTGAGGCCCAAGGATAGAATACTGTCTCCA32.4No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG32.4No Hit
TTCTCGAAGTACACGCGCATGACGATGAGCAGCTGCTCACCGAGCTCGTC21.6No Hit
ATGTCGAGCCGACCGCCGCTGCCGCCGTTCACCCCTGACACTGCCGCGCA21.6No Hit
GTGCCCAGCCTGAGCAACAGAGTGAGACCCTATCTCTACTAGAAAAGGAA21.6No Hit
CTTTTGGATAAAATAAGTTTAAAAATGCACTAACATAACTTTAATGCAAA21.6No Hit
CACATCCACCATGCGCTGGATGATCTTGCCGCCCACGCGAAAGGACAAAT21.6No Hit
GTTCCCTCCGATGTGGTGAAGTGGGCTTTGGCACAGCAAATCTTACCTAG21.6No Hit
GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC21.6No Hit
GCCATAACAAAGTACCACAGACAGAATGGCTTAAAACAACAGAAAACACA21.6No Hit
GTGCTGGACCGCGCCACCTGCAACCGGCGCACGCACCACGACGGCGCCAT21.6No Hit
GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG21.6No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG21.6No Hit
ATGAAAACCCTGAGAGTCAAAACTAAACTATAAATAGTAAAATCCTTTCC21.6No Hit
ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGG10.8No Hit
ACTCCAGCCTGGGCAACAGAGCAAGGCTCTGTCTTGAAAAAGCAAAAACA10.8No Hit
AATTAACCTCAATCCTCTCTCACTCCATACAAAAAAAAAAAAAAAAGATT10.8No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAA10.8No Hit
CTGCAGGTCCTCGCAGGCTCAAGCAATCCTCCCACCTTAGCCTCCCAGGT10.8No Hit
GATTGGGAAGTTTTTGGCTGTTATTTCTACAAACTTTTTTTCTGCATGAT10.8No Hit
GGGTCTCACTCTGTCACCCAGGCTGGAGTGCGGTGATGCAATCACGGCTC10.8No Hit
CACTCATCCCCCATGAAATTGCAGGCCATGTCTACATCTCCATTATATAA10.8No Hit
ATCTTTGCCAAAGCTGAAGTAGGGCCTTGCTGGACTGTAGCTGCTCAGCA10.8No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTGTAGAGATGAGGTTTC10.8No Hit
TTACTGGGGAGGAATCAAAATGGCTCCTCCATACCTCTGACAACTAGTGA10.8No Hit
GTCCATGCCCCCCGTGGCTGGCACCGCGTGCCATGCATACGACCGGGAGG10.8No Hit
TTTTTGCGTTGATACCACTGCTTCCATGTACTTTTTTTTTTTTTTTTTTT10.8No Hit
CTCCTAAGTCTCTGATATAGTCAGTGAGGTGATACGAATATATATGGGCA10.8No Hit
GAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGT10.8No Hit
GCTTTTATTTCAGATCAATGATTATACTGGCACAATTACAATGACTTGAT10.8No Hit
CAGCGCCGATGATCATCTCGTGGCTGGGCAGGGCGACCGGCCGGCCGTCA10.8No Hit
GTACATGGGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAC10.8No Hit
GAGTACTTGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG10.8No Hit
GTTGATACCACTGCTTCCCATGTACTATTCGTTGATACCACTGCTTCCCC10.8No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG10.8No Hit
CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCA10.8No Hit
TTGCTATGTACATCAACCATGATATGCCAGGGCAGAGTGAAGAAGGATAT10.8No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG10.8No Hit
TTGTTGGTCCCCACAGTTCGTGATTGATGGCCTGCAGGTGTGATTTGGAT10.8No Hit
GGCCAAGGAATTTTTGGCAGACAAGGAGGCTGGGGAGGATGGCTGGAGTG10.8No Hit
TTTTGTATTCCCCACAGTGAACTTAAAATTTGCTTACGGAAGAGCAGCTT10.8No Hit
ATATGTATCCTTTAAAGCCTTTTCTTAGCCTTTTAACTTTCTCCTTTCGT10.8No Hit
CAGCTCACCCACGCTGCTGGCCCTGTGAGGGGGCAGGGAAGGGGAGGCAG10.8No Hit
GTGTGGTGGAGGTGGGATTCCATAATTTTTTGTTGGAGCAAGTTCTGGTT10.8No Hit
GCATTGTGCCGTTCGGGTTGCTGTACTTACTCATCCCACCGGTGCTTCCG10.8No Hit
CATTCAGAATGGACATTCCTGCCACAAGGTTGCAGTAGTGAGAGAAGATA10.8No Hit
CCCACCAACAGTGGACATGGCGGTCTCAGGGCAGAAGCCATACTTCTTGT10.8No Hit
GTTATTCTCTCAGGAACTTTTTCTAGTTAAATTATCGTTGGCATAATGCT10.8No Hit
GGGTACAACTCAGGCCCATATGGGAGGCCCTGGTAAGGTGGACCTAAGTC10.8No Hit
CCTAAATTCTATGGCTTCAAGGGAGCATCAGAGAAACGTAAATGCCATTT10.8No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA10.8No Hit
GCAGAAGTGTTTGGGTGACTTTCCTACTTAAAATTTTGGTCATATCATTT10.8No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACCAATTCTGCCCATGT10.8No Hit
CTAGGAGGTCTGTGCTGTCATAGCAAAGACATAACAGTTGAAGAGCACTT10.8No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT10.8No Hit
GCGTTGATACCACTGCTTTATCAACGCAGAGTACTTTTTTTTTTTGTTTT10.8No Hit
GACTTGTTGGAACAGTGAGCTGGGAACTAAGAGATGAATGGTGGTGATGT10.8No Hit
CTTAGAGAAGTCCCTGGGAAGACTCGTGACCTTGTACCTCCTTTAATCAA10.8No Hit
GGATCCACCCCTGCAGGTGGCAGCCTGAGAACATGTGGCTCTCCAAACCC10.8No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCGGAATTCGCAAAGG10.8No Hit
CGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGTGAGTGGGTCTCCCAA10.8No Hit
CATTAAAAGATGCTCAACATCATATGCCATTAGGGAATTATAAATTAAAA10.8No Hit
GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCTGAG10.8No Hit
CACCCCCATCATCCACGGCTCGGCCAAGCTGGCCCTGGAAGGCGACAAGG10.8No Hit
ATGAATAGCTGAGACTAAGAAAACAATGAGAGAGGGAACGATGTTATCAA10.8No Hit
GGCTTGGATTAAGGCGACAGCGATTTCTAGGATAGTCAGTAGAATTAGAA10.8No Hit
CCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGGTCGTTAT10.8No Hit
TCACTAGGGCCTAGGGAACCCAGGAGCAAATCCCACCACGCCTTCCATCT10.8No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTGTACCACTGAGTAAAAA10.8No Hit
GGCAGTCCCTAGAGCCCCTGAGAAGAGCCCTGGTTCTCCAAAAGACAGAG10.8No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8No Hit
CAACGAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAGACGTT10.8No Hit
GCTTAACCTCAATCCTCTCTCACTCCATACAAAAAAATAAAAAAAAGATT10.8No Hit
TCAGAAAATTGCCCAGTTTTCCTTTCTAGTCTTAGTTCCCAGTCTGTCTC10.8No Hit
ATTTGGTGAATGCTGACGGCAAACATCATCCAAGAGAGACAAGATGGGAA10.8No Hit
GGAATAGAAGTGGTTCACTAGGTTGTGGAACACATTTGGCACAACTGTGT10.8No Hit
GGGTTAGAGTTTTTTTTGTTGTTGTTGTTCTGGTGGTGGAGGGTTCAGTT10.8No Hit
GAAGGGCAAAAGCTCGCTTGAGCTTGATTTTCAGTACGAATACAGACCGT10.8No Hit
TCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGT10.8No Hit
GTGGGCCTCAGTTCTTGCAGTAGTTGTGAATCTGTGTCTGAAATCACTAC10.8No Hit
CCACAGGGAATGAAATCAGACGCCTGATGAATTAAGTCTCCTCATACTTC10.8No Hit
TGGGGAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC10.8No Hit
GCACTATTATGTGGGGTACCAAAGGAAGCCCCTTTATTTGTCCCAGAACT10.8No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATT10.8No Hit
TCTCTAGGGACTTCAAGGCTGAAATGATGGTTCAGGAAATGCACTACATA10.8No Hit
GCGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGGC10.8No Hit
GATCAAGATAATGCTGGCCACATTGGCTAAGTTAGAAAGTGTTCTTTCTT10.8No Hit
GGAATGGGCTGACTCTAGAGAGAGCATGGATTTGCAGAATTCATGTCATA10.8No Hit
CCTCTTCACCAGTTTCACTCACCCCAGGTTTGAAGCAGCCTTTCCCTGTT10.8No Hit
CAACCCCACAATATTTTTAAGGCAAATGTAGAAAATATCTACATTTGCTT10.8No Hit
ATCGAATGGAATCGACTGGAATCATCGAGTGGACTCGAATGGAATAATCA10.8No Hit
AACATGCAAACATTCATACAAATGGGGCGGCTCTCGACGGGCGAGGGCGT10.8No Hit
GCACATGAAGAGGCACCTCTGAGGGAGCAGAGAGGTGGATCCTGTAGGCT10.8No Hit
TAAGTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGC10.8No Hit
GTGTGCACCACCACACTCAGATGCTTTTTGTATTTTTAGTAGAGACAAGC10.8No Hit
GGTGGAGGGAGGGGGCTTTGTTTACACTGTGAAAGGAAAACTGCCTACTC10.8No Hit
ACTGAGGGCCGCACGGATGGCTACCGCTGGTGCGGCACCACTGAGGACTA10.8No Hit
TTCCGCATGACCTCGGCCGCCCACTACTACCCCAAGCTCATGAGCATCAT10.8No Hit
GACCTGACCTCTGCAACCAACATCGTGAAGTGGATCACGAAGCAGCAGAA10.8No Hit
ACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCCTGTCTCTT10.8No Hit
GCTGAAAGTGCCTCCTGCGATTAACCAGTTCACCCAGGCCCTGGACCGCC10.8No Hit
ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACTTTTT10.8No Hit
ATATTTATTTGAAAAGGTCAAAAGGAGCATCTATGAGACAAGGGAGGGGT10.8No Hit
ATCAACGCAGAGTACTTTAAAACAAAATGAAAAAGAAGAGCAACAACTTC10.8No Hit
GTACATGGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGT10.8No Hit
ATCATTGGCAGAAAGCTGTACCCCCGCCACAAATCCCAGAATACTGTCTT10.8No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers