FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003630432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003630432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGAGCTGGATGCATTTTTAAAGGAGCCAGCTCTCAATGAAGCCAACTT29.523809523809524No Hit
CCTGAAACGGGCATCGTCGCTCTTCGTTGTTCGTCGACTTCTAGTGTGGA29.523809523809524No Hit
ATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAAACTTCAAATTGAGCT14.761904761904762No Hit
GCATACATCAGGTCAAACTTGTGGTCCAGGCGAGCCCAGGCCTCAGCAAT14.761904761904762No Hit
GGTGGACAAAAAACTGGGACGCTTCTTCTTCTCTGGCTACGATAAGAAGC14.761904761904762No Hit
GATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACAATCACTCTCGAGG14.761904761904762No Hit
GTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCTCACAGACTCCCCCCT14.761904761904762No Hit
AATAGGTACTTGCTGAATCAGTAAAAGAGTGAACAAGAGCAACAGCAAGC14.761904761904762No Hit
CCACTACTTCGACTTAAGCCATTTCGTCTATGCTTCTTCATCAGGGGGCC14.761904761904762No Hit
TAGCTATAGTGAGAATATACAATATTTGTCTTTTTGTGCCTGGCTTATTT14.761904761904762No Hit
GACTACGAAAGTGGCTTTAACATATCTGAACACACAATAGCTAAGACCCA14.761904761904762No Hit
CCTTTTATGTATTTGATACAAATATTAAACATAACTCAGTTTTAGTTCAT14.761904761904762No Hit
TTTTTCAAAAGAACTTTATTAAGAAACACAGAAAAGATACAAAATCCATA14.761904761904762No Hit
CTTCTGGATCCCGTAGGCGTTCTAGGTCCTGCTCTTCTCTTAATGGCTCT14.761904761904762No Hit
TCCTACCACTCCCAATTAATCTTTCCATTTTCGTCTGCGTTTAGTAAATG14.761904761904762No Hit
CGCTGACCCCCTTCGCGGGGGGGATGCGTGCATTTATCAGATCAAAACCA14.761904761904762No Hit
GGCTCTGGGTCCAGCCCCTTACTTAAAGATCTGGAAAGCATGAAGACTGG14.761904761904762No Hit
GTCCGCTTCTGGTCATGAGAGGAGACAGAGGCCTGAAGCAAAGACATCTG14.761904761904762No Hit
GGTGTACACCGCCCTTAGACGTCTTGGTATACGGACAACTGATGGACCCA14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)