FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003630814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003630814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences268
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA186.7164179104477615No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT186.7164179104477615No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG114.104477611940299No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT93.3582089552238807No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC82.9850746268656714No Hit
GGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACG82.9850746268656714No Hit
GTACTTGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA62.2388059701492535No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG51.8656716417910446No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG51.8656716417910446No Hit
CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCA41.4925373134328357No Hit
GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG41.4925373134328357No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC41.4925373134328357No Hit
CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC41.4925373134328357No Hit
CTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTT31.1194029850746268No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTAT31.1194029850746268No Hit
CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT31.1194029850746268No Hit
GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA31.1194029850746268No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT31.1194029850746268No Hit
GATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT31.1194029850746268No Hit
ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG31.1194029850746268No Hit
ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGG20.7462686567164178No Hit
GGCTGCGCTGGAGCTGGCATTCAGCCGTGAGGCGGCGCGTACGCTCGCAC20.7462686567164178No Hit
TTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTG20.7462686567164178No Hit
GCTTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG20.7462686567164178No Hit
GCTTTCCATGTACTCTGCGTTGATACCACTGCTTTCCATGTACTCTGCGT20.7462686567164178No Hit
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG20.7462686567164178No Hit
CATGTACTCTGCTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC20.7462686567164178No Hit
TACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC20.7462686567164178No Hit
GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC20.7462686567164178No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA20.7462686567164178No Hit
CATTTATACCTGAATATGGCTCATAACACCCCTTGTTTGCCTGGCGGCAG20.7462686567164178No Hit
TGATACCACTGCTTCCCATGTAGTGGTATCAACGCAGAGTACATGGGAAG20.7462686567164178No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.7462686567164178No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC20.7462686567164178No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACTTGGGAAGCTGTCTCT20.7462686567164178No Hit
GTTATCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACC20.7462686567164178No Hit
GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG20.7462686567164178No Hit
GGTAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACG20.7462686567164178No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCTCTTAT20.7462686567164178No Hit
CTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGC20.7462686567164178No Hit
GGCAACAGTGCGATTCGGGTTGGCGGTATCAGGATCGTCGATCCACTAGA20.7462686567164178No Hit
ATACCACTGCTTCCCAAGTACTCTGCGTTGATACCACTGCTTACCCAAGT20.7462686567164178No Hit
TGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC20.7462686567164178No Hit
CAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA20.7462686567164178No Hit
ATCAACGCAGAGTACAGGGGGGTATCAACGCAAAAAAAAAAAAAAAAAAA10.3731343283582089No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTGCGTTTATACCAAAGCTTACC10.3731343283582089No Hit
GGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAATTA10.3731343283582089No Hit
GCGTTGATACCACTGCTTCCCATGTACGCTGCGTTTATAACACTGCTTAC10.3731343283582089No Hit
GTACATGGTAAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAGTGGTA10.3731343283582089No Hit
GCGTTGATACCACTGCTTCCCAAGTACTCTGCGTTGATACCACTGCTTCC10.3731343283582089No Hit
CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCAAGTACTC10.3731343283582089No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACTTGGGCTGTCTCTT10.3731343283582089No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG10.3731343283582089No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.3731343283582089No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGCGAAGCAGTGG10.3731343283582089No Hit
CTTCCCATGTACTCTGCGTTGATACCACTGCTACCAAAGTACTCTGCGTT10.3731343283582089No Hit
TCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA10.3731343283582089No Hit
GCAGAGTACATGGGAAGCAGTGGTATACACGCAGAGAACAGGGGAAGCAG10.3731343283582089No Hit
GATTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.3731343283582089No Hit
GAGTACTTGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG10.3731343283582089No Hit
GTACATGGGTAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGGGGT10.3731343283582089No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.3731343283582089No Hit
GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG10.3731343283582089No Hit
GTACATGGGTAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGT10.3731343283582089No Hit
GTTGATACCACTGCTTCCCATGTACTCCCCATGTACTCTGCGTTGATACC10.3731343283582089No Hit
GGTATCAACACAGAGTACATGAGAAGCAGTGGTATCAACGCAGAGTACAT10.3731343283582089No Hit
AACCTGGAGCGCACCGCATCGAGCAACGAGCAACTGGCCGCCACCGTGCG10.3731343283582089No Hit
ATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGTCTCTTATACAC10.3731343283582089No Hit
ATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCCGGTGTATCAA10.3731343283582089No Hit
GCGCTCGATCGTGCTAAAGCTCAAGCATGGCGGCAAGATTGGCCTGGCCC10.3731343283582089No Hit
CAGAGTACTTTTTTTTTTTTTTTTTTTTTTTCGTTTATACCAATTGTTAC10.3731343283582089No Hit
ACATGGGAAGCAGTGGTATCAACGCAGAGTACTTGGGCTGTCTCTTATAC10.3731343283582089No Hit
ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA10.3731343283582089No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACCTGT10.3731343283582089No Hit
TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGG10.3731343283582089No Hit
AGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAGAGTA10.3731343283582089No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTTACCAATGCAA10.3731343283582089No Hit
CGCAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAATGCGTTTATACCAAT10.3731343283582089No Hit
GAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCA10.3731343283582089No Hit
CAACTCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGAAG10.3731343283582089No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGTTAAGCAGTGGT10.3731343283582089No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCAAGTACTCTGCGT10.3731343283582089No Hit
GAGCGAAGGCTTCTCAAATCATGAAAATTATTAATATTACTGCTGTTAGA10.3731343283582089No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCCTGTC10.3731343283582089No Hit
CCAGAACACCACCCCGGAACAGATGAAGATGTTCCTCACGCGGATCGGCT10.3731343283582089No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC10.3731343283582089No Hit
GGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC10.3731343283582089No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTATGT10.3731343283582089No Hit
CTCTTGGGACGCGACGACAACTGGATGTCTGACGTACGCGGCAAGAAGGT10.3731343283582089No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTC10.3731343283582089No Hit
GCTTCCCAAGTACTCTGCGTTGATACCACTGCAGAGTACTTGGGAAGCAG10.3731343283582089No Hit
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAATCGTTTTAAACAAA10.3731343283582089No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGAGT10.3731343283582089No Hit
GTACTTGGGGAAGCAGTGGTATCAACGCAGAGTACATGGGGAAGCAGTGG10.3731343283582089No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGGGG10.3731343283582089No Hit
CCCTAAAACTCTGCTTAATTCCTCAATGGCAGCATCTACTGCTGTCTCTT10.3731343283582089No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA10.3731343283582089No Hit
TCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGA10.3731343283582089No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTTGTA10.3731343283582089No Hit
GACGGTATCAACAGGAACATCCTCGTGTTAGATATTGAGGCTGCTTCGTG10.3731343283582089No Hit
CTTACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.3731343283582089No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGAAGTGT10.3731343283582089No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTTAT10.3731343283582089No Hit
ACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTACCATGTACTCTG10.3731343283582089No Hit
ATCTCATACAGCGTTACGGTCGCTGCGTACTGTATAAGGATGCTCTGTGA10.3731343283582089No Hit
GTACATGGGTAAGCAGTGGTATCAACGCAGAGTACATGGGTAAGCAGTGG10.3731343283582089No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCAGTAAGAATCGGTGGTT10.3731343283582089No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC10.3731343283582089No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGGAGTACATGGGAAGCAGTGGT10.3731343283582089No Hit
GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGT10.3731343283582089No Hit
CCAGTACTCTGCGTTGATACCACTGCTTCCCAGTACTCTGCGTTGATACC10.3731343283582089No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCTGTCTCTTATACACA10.3731343283582089No Hit
TCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAA10.3731343283582089No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA10.3731343283582089No Hit
CATGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAA10.3731343283582089No Hit
GCTTCCCAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.3731343283582089No Hit
CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTC10.3731343283582089No Hit
GTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATG10.3731343283582089No Hit
CCACTGCTTACCCATGTACTCTGCGTTGATACCACTGCTTACCCATGTAC10.3731343283582089No Hit
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC10.3731343283582089No Hit
CATAAGGGCACGGGGATCGATATGATCGTATTCCACGGCATAGCCAGGCA10.3731343283582089No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTTTTTACCACTGCTTCCC10.3731343283582089No Hit
GTACTTGGGAAGCAGTGGTATCAACGCAGAGTACATGCTGTCTCTTATAC10.3731343283582089No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCGGAGTACTTT10.3731343283582089No Hit
ACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC10.3731343283582089No Hit
GCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTG10.3731343283582089No Hit
CCCATGTGCTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT10.3731343283582089No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTATAAC10.3731343283582089No Hit
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTTCGTTGATACCACTG10.3731343283582089No Hit
CCAAGTACTCTGCGTTGATACCACTGCTTTCCATCTGTCTCTTATACACA10.3731343283582089No Hit
ATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAA10.3731343283582089No Hit
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAGTAATCAGCGTTTAAACCACT10.3731343283582089No Hit
ATGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC10.3731343283582089No Hit
ATCAACGCAGAGTACATGGGGGTATCAACGCAAAAAAAAAAAAAAAAAAA10.3731343283582089No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAC10.3731343283582089No Hit
GTGACGAGGTGACCGTGGCCCGACAAGGTGACATCCACCCGCTCCCGATG10.3731343283582089No Hit
GTACATGGAAAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTA10.3731343283582089No Hit
ATGTTCAACCAGTAACTACTACTAATCAACGCCCATAATCATACAAAGCC10.3731343283582089No Hit
ATGTTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC10.3731343283582089No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers