FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003630828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003630828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGA228.57142857142857No Hit
AGGATGTTCCTGTTGATACCGTCTGCGATAGGCTAGTTCATAAACGAGGG114.285714285714285No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC114.285714285714285No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAA114.285714285714285No Hit
TCATTGCACCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTGGC114.285714285714285No Hit
GTTAATAATTCTGGCAATTCGTCTCCACACTAGAAGTCGACGAACAACGA114.285714285714285No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers