FastQCFastQC Report
Wed 27 Apr 2022
EGAF00003630931

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003630931
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAAAGCGAAAGTCATTCTTCCGCCGCTGACACCACGAGCCTTCCCAAT25.88235294117647No Hit
GGCTTGTTCGCGAAGCTCGGAGTGAGCCAGATCGCCGTCGTACCCAGACC25.88235294117647No Hit
GCATTCCTTGATCTTTGCGATTTGGACAGCGAGCGATCCGACAGAACCCG25.88235294117647No Hit
GTACGGAGTCGACGCGGCCTGACAGAACCCAACCGTCAGGCGCCGGCTCG25.88235294117647No Hit
GCCGATGACCTGCGCACCGCGCCAGTCGCGCGAGGAGAGCACCGTCCGCA25.88235294117647No Hit
CTCCATCTCTACTAAAAAATCAAAACTAGCCAGACATGGTGGTACACGCC25.88235294117647No Hit
GTCTCGGAGTTGGTCTGCGGAATCTCTTCGCGCAGGCGGCCGATCTCGTG25.88235294117647No Hit
GTGTCGAGCATGCGCCTGGCGCCAAGGTAGCGATCGACCAGGCGAAAACC12.941176470588235No Hit
GTTCTGGGGTTGCAGTTCTTCCGTGGCGATCAGGGCGCAGCGCTGCACCA12.941176470588235No Hit
CTTCTAGGAAAAGAGGTCGTTTTCAAAGGTTGGTGGAATAAACAGGCAAA12.941176470588235No Hit
ACAAATATTTCTTTACTTTTTCCCCACTCTAGTTTTGGGATTCCATCATA12.941176470588235No Hit
AGATCTTGTGTGGATAGGCCTGGTGGCCGACGTCCCAGATCAACTTGTCG12.941176470588235No Hit
GTGAGCAGGTCCAGCTCGCCCGCCCGCGCCACCAGGTCCAACGGGTACTC12.941176470588235No Hit
GGGTCGCGTCCCGCTGGCCGTACGCCGTCCCCTGGTCCGGGTCGTTGTCG12.941176470588235No Hit
CTTTCTTTGTGCAAGTTTCCTTTCTGTGACTTTACTGGATTTCATTGGTA12.941176470588235No Hit
TCCCAGGTCGCAGCCTCGGTCGCAGCCTCGGTCGCAGCCCTGGTCGCAGC12.941176470588235No Hit
CATATGTAAGCGGGTGACACTTCCTCTGTGTCGGGAATTTGCTGGAGACC12.941176470588235No Hit
GTCCAGGATTCGGGGTTGTTGAAGCCGGCCTGCTCCTGGATCTGTCTCTT12.941176470588235No Hit
CGACCGTCGATCCGGCAACCGGCTGGGCACGGCCGCTGACCTGACCACTT12.941176470588235No Hit
GCCTTCGGGTGGCCGCGGCGGTCACGCCCGGGTGGCAGCCGTCGGTGCTC12.941176470588235No Hit
CTTCGACTCGGGCTCAAAACGAGCCGGGCGCATCAGCTCAACCACTGTCT12.941176470588235No Hit
CTCTGACAGGGCCTCTGACGTGAGACCCAGGTTCGGTGCCCCAAGGGGAT12.941176470588235No Hit
CCCCGCAGGCGCGCCGGTCGTCCGGAAGCCTGTCTCTTATACACATCTCC12.941176470588235No Hit
GCTCCTGGGTGCCCCCTTGCTGCTGCGCGGCGAACCCTTCGATCTGCAGA12.941176470588235No Hit
CGTTCACGGGAGCAGCGAAGCATGACAGCTGTGTCTGGCTCGAAATTGTC12.941176470588235No Hit
GTACGGCTGATGGCATCTTTCATATTCGCAGCCACGTAGTCGGAGATATC12.941176470588235No Hit
CAACATAATCTGCCAGCAACTTAGACCCGTTGCGACACGAACACGTTGTT12.941176470588235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)