FastQCFastQC Report
Wed 27 Apr 2022
EGAF00003630932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003630932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCAACGACGAGCAGTACTTCGAGGCACTGGAAGAATTCGGCTACTACT25.88235294117647No Hit
ATTATACATAATGCTGGGATAAAATTCCACTTGGTTGTAATACATAAGTT25.88235294117647No Hit
TTGCCGGCTGGCGCGACCGCGCGATCATCGACGCCGCATCCGCTACTAGG25.88235294117647No Hit
TGCTCTGCCAGAGGATGTCGGGGGAGCGGGACTCGGAATGCTAGGCCTGG25.88235294117647No Hit
NAGTTCTACTTCGTCATGACCGACCGCTTCGCGAACGGCGACGCGTCGAA25.88235294117647No Hit
GTGCGCGACGCGCGCAACGGGCCGCAGTTCCTTGCCCGCGTGCGCGAGGA25.88235294117647No Hit
CCAACGGAGGGCTCAAGACCAAGAGCACCAGGAACAACAGCCTTTGGTAC25.88235294117647No Hit
GGTACTGATGCGGATATCGCGCAGGTTCAGGTGCAGAACAAACTGCAGCT12.941176470588235No Hit
GGACGCTGATCTATTGCTCATCGACTGCGAGGACCTGATCACCGCTGGCG12.941176470588235No Hit
GGTAACAACACGGTCCTGGGGATGCTGTAAGGAAGGGTTCACACACTGGT12.941176470588235No Hit
GTTGCCATGTAAGCCACACAAACCGGCATCATTGTCTTGTTTTTTACGAT12.941176470588235No Hit
AGGAAGGGCAGCTGGCAAAGGTACCCTGGGACTGGATGCTCAGGGCGTCT12.941176470588235No Hit
TCTTATCTCATTGAAATAGTGTAGTCGGCGTCACAAAAAGGTGCGGTCTT12.941176470588235No Hit
TATTAAAGATTATAAGATATCATCTGCCAGCATAGAAAGCCAAGTTGTTT12.941176470588235No Hit
GCCCGACACGGGCGGCTGCGACGCAGGCACCCCGTGCGCACGGTGACGAA12.941176470588235No Hit
GCGCCCAAGAAAAGCGTGACGGAAGCGACGTCCAAGTGCCTTTCCCTGCT12.941176470588235No Hit
AGCCAGGAAATCATCCGTCTGCACCAGCGCATTGCAGATGGACGGCGCGA12.941176470588235No Hit
GCGCAAGCTTCCCCATTCCTCGCTGCGTCAGGTTGCGGACGAGTTACGGT12.941176470588235No Hit
GCCCTGGACATCGCGCCCGCGCCAGAACCAACCGGCGCTCTCGATCTGCA12.941176470588235No Hit
ATCCAGGAGCAGGCCGGCTTCAACAACCCCGAATCCTGGACCTGTCTCTT12.941176470588235No Hit
GCTTCCGGACGACCGGCGCGCCTGCGGGGCTGTCTCTTATACACATCTGA12.941176470588235No Hit
AACCAGAAGAAGGCGGAGCGCACCTCGGGAACCGATTCGTAGAGCGTCGC12.941176470588235No Hit
TGGTTGAGCTGATGCGCCCGGCTCGTTTTGAGCCCGAGTCGAAGCTGTCT12.941176470588235No Hit
CACTGGGACCGGGCGGAGTACCCGTTGGACCTGGTGGCGCGGGCGGGCGA12.941176470588235No Hit
AGCGTACGGTCGGCGGCCTGTGCGCGGGTCCGACACCCGGCGCGCACGTG12.941176470588235No Hit
GGGCTGCGACCGAGGCTGCGACCTGGGATGCGACCTGGGCTGCGACCGAG12.941176470588235No Hit
TTAGTCACGTCAGCTCCTTAGCTTGCTTCCCCTCGAGGGTGTGCAACAAC12.941176470588235No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)