FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631005

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631005
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATGGCGGCTACAGCCAGCGCGATGTGACCGAACTCGCGCGCATGCTGA32.857142857142857No Hit
GTGTGATGTTCCTGTAAAGAAGCTGTATGTTTAAGAGCCTGATGGAAGGG32.857142857142857No Hit
GTGTGTTCACTATCCGCAACTCTATAACTTTAAGGATATTTAAAAAGCGA32.857142857142857No Hit
AGCCGTACCGCCGCCGCCGTAAGAGGGCACGATCAGGATGTAAGGCTCGT32.857142857142857No Hit
ATGGGAGACCCTGGCACGCATCATCGATACCAGCTCACCGGCAACCCTGC21.9047619047619049No Hit
GGACTGTGGGCTAGGCAGAGTTTTACATCTTCTTTTCCACTTTCCAGCTT21.9047619047619049No Hit
GTTAAAAAGTCATTATATTCTTGTAATACAACTTCAACAGCATTTGGCCA21.9047619047619049No Hit
GTATGGTACTTTTGCAATAGAGTAAATGACTTTTGGAGGTTTTTTTGTTT21.9047619047619049No Hit
GCCACACTCGGGAGGAGAGTTGGGAAAGGCTCATCGGACCTCCTGGATGT21.9047619047619049No Hit
GTGGTCCCGGTGGCTAGCAGCACAATGTTGGCGTCGATTGTCTCATCGTC21.9047619047619049No Hit
ATTAGGACTGCCCCCTCTGCGGTGGGGCTCAGCTGATCGGCCGCTCCGGG21.9047619047619049No Hit
GTATGACGAGGCTCTTGGTTATGAAGGCGACGCTGAGAGCATCGACGAGC21.9047619047619049No Hit
GCAGGATGCGGGTCTCGGGCCAATGCTGGCGCAGCCGTTTGAGCACCCGC21.9047619047619049No Hit
TATCATGATAGAAACTCCGAAAAAAGCAGGCTATCGTATGCCAGCAGAGT10.9523809523809524No Hit
CGATCGCTCGGCTGTGCCTGAGCGAATCGGCGCTGGCCTCGAACAGCCAG10.9523809523809524No Hit
GGATGACGGCCCGGCACCCAGCACACAAACAGCGACAGTCCCGAGGGTTC10.9523809523809524No Hit
GTATCCAACTGCTTCACTCGGTACACAGTGTATTCCGCCTCCGGATATGG10.9523809523809524No Hit
CTTCAGCAATATGGAATAGACAAAATGGTGATTTCGCCAGGAAGCAGAAA10.9523809523809524No Hit
ACCCCGTCTCTACTAAAAATACAAAAATGAGCTGGATGTGGTGGCTTGTG10.9523809523809524No Hit
GGCTCAGTCGAAAGACTGGGCCTTTCGCCCGGGCTAATTAGGGGGTGTCG10.9523809523809524No Hit
TGATCTTCGTGATCCCGGCGTTCAAGGAAGTGTTCACCTCATTTGGTGCC10.9523809523809524No Hit
GTAATATCCATTGCCATTCACAATATTTACACGTTCCAAGATATATTGGT10.9523809523809524No Hit
GAGTACATCGGTTTCCTCGGCACTCTCGAGCCCCGCAAGAACGTCCCGAA10.9523809523809524No Hit
ACCCTCCAGTTGACGATGAATTACCGCGTCAACGCCCGACGTTAGCGTTT10.9523809523809524No Hit
AGATTACAGGCATGCACCACCATGCCCGGCTAATTTTGTATTTTTAGTAG10.9523809523809524No Hit
ACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGA10.9523809523809524No Hit
TTATATCCCTTTGCTGACTCTCCTTTCGGACTTAGCCCGCCTGCACCCAG10.9523809523809524No Hit
GCCTGCCACAGCTCTGAGCGCAGGGCCTGGTGTGGAGTGGGGGCCCATCC10.9523809523809524No Hit
GTGTTGATCGAGGCCAACTACCGCGACCGCTTGGCCGACGCTCCCCTGCC10.9523809523809524No Hit
ACTCCAGCTTCTGGGGGGCTGACGCCCTACCGACAAATTCTCCATAACCG10.9523809523809524No Hit
CCGCCGGTGCAATCGGCGGCGTGCCGGGCTCGCCCAGACCGGTCGGGTTG10.9523809523809524No Hit
AAATTACCTTGTTCAGGCCGAGCATGGTGGCTCAAGCCTGTAATCCCAGC10.9523809523809524No Hit
CAACCGGCCTGTTCAAGGACGTTCGCATCAGCATCGAGGGCAATGCCGTC10.9523809523809524No Hit
CAGCAAGCCAGTGCTGCGTGCTCCGAGTTCCAGGGCATCCTCCAGCTCAG10.9523809523809524No Hit
GGCTGGCTGTACGTGGCGTTCGTCATCGACGTGTTCGCGCGGCGCATTGT10.9523809523809524No Hit
GGATCTCATCTGTCGCCCAGGCTAGAGTGCAGTGGCATGATCATGGCTCA10.9523809523809524No Hit
ACCCAAGGCATCGCCATGACGCAACCCTCCGCTCCGTTCGCCCAGTTCGC10.9523809523809524No Hit
GGACCGGGCGGAAGATGCCGCGCTCAACCATCAGTCGCAGCGTCGCCACC10.9523809523809524No Hit
GTTCGCCGATCTGGTTCAGCTGGGCCAGATTGATCGGCAGTGACGGGCTG10.9523809523809524No Hit
CTGATGACCAGCTTCGCCTTCATCTTCGGCGTCATCCCGCTGGCGATTGC10.9523809523809524No Hit
CAACCGAACTGGCCAAACAAATTTTCCCTTTGGTCAGTGAAGTGATCAAT10.9523809523809524No Hit
GTGTCCAGGGTAGAGAAAACTTACTTCCCTTCCAAGTCCTCACCCAGCCC10.9523809523809524No Hit
GAAGGATGCGGTTCTCGGGCCAATGCTGGCGCAGCCGTTTGAGCACCCGC10.9523809523809524No Hit
GTCCTGACACTTGCCTGGAGTCACACAGCTGCTTTGAAGCATCCAGTGAT10.9523809523809524No Hit
GAGGAGGCCGGAGACCAGCCCAGGCCCAGTCCAGGAGGAGCCTGGCCAGG10.9523809523809524No Hit
ACCAAACACGGAGCACCTAGTAAACACCAGGTCAAGTCCCACCCTCGAAG10.9523809523809524No Hit
CATACAAAGTTTATTAAGACTGGCGCCCGGGAAGGAGGCTCTCGGGCTCC10.9523809523809524No Hit
GGGCAAGAAAGAGCGCGTCGGCCGTATGGTTCAGATGCACTCCAAGGATC10.9523809523809524No Hit
GAATAAACTCCCAACAGATCTTGAGTAGCTTACTCAGTCTTTTATGCCCG10.9523809523809524No Hit
TCTATAATCTTACCCCAAACCCCGTGATCTCTGAAACATGTGCTGTGTCA10.9523809523809524No Hit
GTTTTGGTAGAAATTTGTGATTTTTTTTTTTTTTCTACCTTCAGAACTGC10.9523809523809524No Hit
GATGTGCCTCGCAACATCCAAGTGAGCGATGTACCTGAACATATCAAACC10.9523809523809524No Hit
GGGCAAGCGCCCGTGTTCGCCGGGGTCAGCGGTGGCAAGGACAGCCAGGC10.9523809523809524No Hit
TCGCAGCTTCTGAAAGAGCTTCAGCTGCTTCCAGCATATCAGCCACGACA10.9523809523809524No Hit
GTACGGGCATGCCGCCGGCGATGCGGCATTGGCTGACCTGGCCACGATCC10.9523809523809524No Hit
GTGCCAGAAGCAGAAGCCCAATCCCTCGCTGGCCGAGATCTACCCGGCCG10.9523809523809524No Hit
GGTGAGCAGCAGGAAGCCCTGCGCGAGATCCTGCTCCAGCACCAGCGGCG10.9523809523809524No Hit
CAGCTTCCCCGCTGGGTTGCTGCGCGCGCAAAACAGCTCAACTTAGAACT10.9523809523809524No Hit
ATATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAA10.9523809523809524No Hit
CAGATCGGTGGCGTACGTTTCTTCCACACTGACCGACTTGCGGATCTGCG10.9523809523809524No Hit
CACCGGCACGCAACGCCGTGGCCAGATCGGCTGCGTCTTCACTAACCGTG10.9523809523809524No Hit
ATTCGCCGCGTGCTGGAGACCTTTGAGCGCGACCAGCACCGCAAGGCCCT10.9523809523809524No Hit
GAGGCTAGGCAGCGGGACTCGCCGCGATGGAAAGACCAGCCGCAGTAGGT10.9523809523809524No Hit
GTCCGGCAAGCTGACCATCATGCTGATGTTCATCATTGCCAACGCCATGC10.9523809523809524No Hit
TCCCCGGTTAGTGGCTCGCCATCGAACAGGGAATCCAGTTGTTCAATCAG10.9523809523809524No Hit
CAGTAGTACTTAAACCAAGTGATACTACGCCTGAAAGTACGCTTTTACTG10.9523809523809524No Hit
ACATTAGTTCTATATTGCTGAAGTATAAAATGGAAGATGACTGAGTAGAG10.9523809523809524No Hit
GTGTCCACCTGGATGTCGGCCAGCACATACTGGCCGCGCACCTGTCCGGG10.9523809523809524No Hit
CTAACTAGTCATCAAGAGGGTTTCCTAAAAACAGATACCGAGATGGAGTG10.9523809523809524No Hit
GATCGAAGCGACGCTCGCCGAATGGCTGGGCGAGCGCGCCGAGGCGGGGC10.9523809523809524No Hit
GAGTTTCAAAAGTGCTCTATTGAAAGGAAGCTTCAACTCTGTGAGTTGAA10.9523809523809524No Hit
GTATTTACGCACATAGCTCACCAGGGACACCAAAAGTACGGGTACGGTCA10.9523809523809524No Hit
AGTGTGACTTTAGCTATAAGCTTTACTTACATGATCGTTAAAAGAATGAG10.9523809523809524No Hit
CCCTAAATCATCACTCTCAAGTTCAAAGTTCCACAAATCTCTAGGGTAGG10.9523809523809524No Hit
TCTTGAGACACATGAAGGGCCATCGCGAAACGTGATTTTAAACACACCAG10.9523809523809524No Hit
TCAGCAGGGCAATTCGAGCGTCGATCTCATCGACCGACAGCAACGACAGA10.9523809523809524No Hit
GTCCGGCGCGGTAGCGAAGCCGTGCGATGCGGGCTGCCTCCGCGCTGTTT10.9523809523809524No Hit
TCTATCAGGACGGTGCAATGCCTGGCCTCCTAAGCCGCCAGGATGCCTCG10.9523809523809524No Hit
ATCTCGAACTCGCCGCGCCAAGCCCGATCATCGAGACCGGGCTGGTGTGG10.9523809523809524No Hit
CGTCTAATCCCAGCACTTTGGGAAGTTGAGGTGGGCAGATTGCTTGAGGC10.9523809523809524No Hit
GTGTTGAACGTTCCAAAAAAGCCCTCAAGGAAGCTGACTTAGTTCTACTA10.9523809523809524No Hit
GGCATATTGTATATATCTTATAATTCATCCTTTCCAAGTGTATGATTTAG10.9523809523809524No Hit
AGGTAATACCTTCCCCAGCCCATTGCCTCACCTCCCTTCCTGTTTCCCAT10.9523809523809524No Hit
CATCGGCATCGAACACCCGAACGTGATGGACTTGCCAGCGCAGCGCGTTT10.9523809523809524No Hit
AGCGCGACCTTCGGTCACCCGCCTCCCAGGCTTCCTGAGCGCCGCACAGG10.9523809523809524No Hit
TCTATACACAACATACACCACAGTCAAACACTCAAGGGAAAAAAATATAA10.9523809523809524No Hit
CTTTTCCTTTGCTACCAGCTTTTGAAACTGAAGTGTAGCAGAGTCATGAA10.9523809523809524No Hit
GCTTTATATTCAGATCACTTTAGCTTTTATTTTATTTCTGACTTGTCTTT10.9523809523809524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)