FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGAAGCGTTGCGTGCTCAGGGCTTTCGTCAGTTGCCGGTAGTGATTG32.857142857142857No Hit
GGATCACTCCGAAGACCAGACCCACGGCCAACAGGAACTGGCGTTTTATA32.857142857142857No Hit
GAAAAAACCTGCCCTCGTGATTCAATCACCCCCTACCAGGTCCCTCCCAT32.857142857142857No Hit
ATCATCAGCACTCCCCTCATTCTTTATTTGGATGGATACGGCATCGCTAT32.857142857142857No Hit
GGAAGGCCAGATGCCGGGCCGTGGCCGGGTGGGCGGCGAGCACGTCCAGC32.857142857142857No Hit
AGAAGAAGCGGCTGCGGTATTGGCATCGGTTGAAAGTGAGCCTGGGCGTA21.9047619047619049No Hit
ACACCGAGACGTTCGAGGTTGACCTCGACGCCGTTAACTCTCGGGTGCGT21.9047619047619049No Hit
GGGCACGCGGGAATGACCGGTCTCTCGCCGGAGCAGCGGCTTTTGCTTGC21.9047619047619049No Hit
CGTCACCTATCCCAATGGCGATCAGTGCCAGTTCCTCGACCACGACTTCT21.9047619047619049No Hit
GTCTGGCGGAAGCAACGAATGTCGAGGAAGCAATCACCTCAGCACAGGCC21.9047619047619049No Hit
GGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAAACCCGTCTCTA21.9047619047619049No Hit
GACGAGGGCGCCAGTGTGTGGTTAAATGTCAGAGAAAAAGGGGAGCTATG21.9047619047619049No Hit
GTAGCAGGGCGCCTTCGTCATGGGGCAGGTGCTCCAGGGTGCCGGTAATC21.9047619047619049No Hit
GGCACTGGGCGGCTGAAGGCTCCGGAACTGCGCCTGCGCTTTTCGGTGAG10.9523809523809524No Hit
GGCTTACTGGCGCAGGTGGCTGATTGTGGATCCGACCTCCACGATGGAAA10.9523809523809524No Hit
CGGTTGGGTCAATTGAGCCTAAACCTTTCAATGTTGAAACGGATGGCATT10.9523809523809524No Hit
ATACTGCGGCATCTACTAATAGTGGCTTGTCAAGCGAAGGTGTTAATTTG10.9523809523809524No Hit
CACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTG10.9523809523809524No Hit
GTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAACT10.9523809523809524No Hit
ACCTCGCAGGTGCCGTGAGAAAGTGGAGATGAGCAGAGTCTGGACGCATG10.9523809523809524No Hit
CTCCTTGAGGCCGACGAAGTTGACGTTGGCGATGATCGGGCGCTCGTCGA10.9523809523809524No Hit
GGCCGAAATGCAGACGGTGCATCCCCGGTGACCTCGGGGACCCTTCTCTG10.9523809523809524No Hit
CCCAGCAGGTGCAGGCCAGGCCACCCCCAGCAGGTGCAGGCCAGGCCACC10.9523809523809524No Hit
GCCCCCACACTGCCACCTCGGCCCCATGGAATGAAATATTGGATTAATAT10.9523809523809524No Hit
CCTGCAGCGAACATCGTCGAGAGCGTGCGTGTCCAGCGCGCTACGGCGGC10.9523809523809524No Hit
TGCGCATCCTGCGCTTCTTCCGCTTCCACGCGCGCTTTGGCGATGCGCCG10.9523809523809524No Hit
GTTGTGGTAAAAACCCAATTGCCATATCAATCTCACCATTGGCCATCTGG10.9523809523809524No Hit
GTCTCCAAGATAGGATTGAGCTTCAGATAGATGGTCCTGCTCCACCAAAA10.9523809523809524No Hit
GGCACAGACCCATCTCCTGGGCTTGTCCTTAACCTTGGCAAAATAAACTT10.9523809523809524No Hit
ATCTTGGGGATAATCATAAAAACCACCTTCTCACTGCACATTCACCTGGC10.9523809523809524No Hit
GTATGGCGCGGCTCAAATTCTGTTCGGGTTTGATTTGCATGTGAATCGTG10.9523809523809524No Hit
GCCTCGGCCTTGCAATCGTCAGCTTTGGCGGTGCTGCAGCGCATCGCCGT10.9523809523809524No Hit
GATCTCGATGGCACGCATATTCGTCTCCTCTTTAGCTTTCTCTCCGACGG10.9523809523809524No Hit
AGCTGGACCTTCCCCAACACCCGGGCGGCGCGCTCGCGCATCGCCCAGGC10.9523809523809524No Hit
ACCAAATACTTATTTTATTTTGTTAATCCTTTCAGAGGTGCAATGGTTTT10.9523809523809524No Hit
TCGCCGCCCTGGCCGCCTGCGGCGGCGGCAATGCCCAGCTCAACCCGAAT10.9523809523809524No Hit
CCTGTCACCGCCGAGGTGACGAACAGGTTCAGCCCCACCGGTGGTGTGAT10.9523809523809524No Hit
ACTACAGGTGCTTTACCACCAAGCTCAAGATGCGCTTTCGCTAGATTTGC10.9523809523809524No Hit
ATCTTTAGTTAGTTGTCTTAATAAATGCTACCTGTAAAGCCTATGAGAAA10.9523809523809524No Hit
GGGAGGGCTCTTTCCTGGGGAGTGAAGGGTGGGGGTTTATGGGGCTGCAG10.9523809523809524No Hit
GCAGAGACCGTAGCCGATCCAAAAGTTCAAAACGATGAGACCGATTCGCC10.9523809523809524No Hit
CCCATATGCGCTTCGTCGTGCAACACAAGGGATTGTTCGTATCTTGGATG10.9523809523809524No Hit
GTGCCCGAGCCACCTGGCAAGCAGATCCTGGAAGAGCAGTTCGGCAGCCA10.9523809523809524No Hit
GCTTGAAAGGGGCTCTGGATCAAGTAGACCCGAATGATGCTCATCGGCTC10.9523809523809524No Hit
CTCCTGCAGCAGCCCCTGCACCAGGCCGGCACGACCAGCGCTGGCCTTGC10.9523809523809524No Hit
CCTGTAATCCCAGCTACTCAGGAGGCTGAGGCGGGAGAATCGCTTGAACC10.9523809523809524No Hit
CCAAAGTGCTGGGATTACAATCATGAGCCACCGTGCCTGGCCCTTCTTTT10.9523809523809524No Hit
GGCCGACAGAGCCGCTGCCTTAGCGCGGGCCGTAGGCGCGGGCCGCCATC10.9523809523809524No Hit
ATTTCATTCATTTCATCTTCCATCGCTGATACCCTTTCTTCCAGTTGATC10.9523809523809524No Hit
GCCTTCCAGACGCAGTTGCTGAAGAATATGCAACGCGCGCTTACTTTTTC10.9523809523809524No Hit
TCCACGAGGTGGGCGCGGCCCAGCCCTTCTCCTTGAACATCTTCGCGTTG10.9523809523809524No Hit
GGCGTCTACAAGGCGCTGGGTGGCTGGAAGCAAGGTGAGGCACCGGCCGC10.9523809523809524No Hit
CTCCTAAGCAGGCTGCTCCCCTCTTCTCTCACAGCAACCATCATAGATAT10.9523809523809524No Hit
GACATGACCTGTGCCCATCAGAAGAGCTGGGCATTTGTATCCCTCAGACC10.9523809523809524No Hit
TGTATATTTAGAGCGTTTTGAGGCCTACAGTAGGAAAGGAAATATCTTCA10.9523809523809524No Hit
TTGTTAGAGTTCCTTGCCATCCAGATTCTGGGTTCCGTGTCTGCCATTTC10.9523809523809524No Hit
GGATAGAGGTGAATGTGACCTGCACTCACAAGAACTTCATAGGCCATTGC10.9523809523809524No Hit
ACTGAAAGAGAAGCAGCTGAAGGCGCGTCTGCTGTTGCAAGTACACGACG10.9523809523809524No Hit
CAAGGACCCACAGTCTAATATATCAAGAATATTTCTGAGCACCTTGTGTT10.9523809523809524No Hit
GGCAAGTGGGCCTTGAAGGCGTTGACGGCCTGGTTCACCAGTGCCACGCG10.9523809523809524No Hit
GTATTCGGCTTTCGGCGTGGCAAGGTTTCCCGGTATCGCGTCATCAGCGA10.9523809523809524No Hit
GGCATAGAGTAGATTGGTGGTTTCTTGGGTTAGAGAGGAGGGGGAGAGGG10.9523809523809524No Hit
GGTATTATACGGGGCTTCCTTCCAGCCTCATTCCAGCATTCTCTCAGCAT10.9523809523809524No Hit
GTGTCTTGGCCCAGGGCACAGGGGAAGGGAGGAAATGGGGAGGTGGGGAG10.9523809523809524No Hit
CCACAGGAACATGATGAACGCCGCCAGATACATCAGGCCGTACCAGCGGA10.9523809523809524No Hit
GAGTGGGGCACCATGCTCTCCGACGTGTTGCAGTTCGCGCAAAGCGCCTG10.9523809523809524No Hit
GGACAAGTTTGTCTGGGTAGAGGTGGATCGGCCGGAACAGCCGGATTATC10.9523809523809524No Hit
GTTCACTTCCGAGTTGGCTTGCTGGCGAAGTAGGACCAGGCCATAGCCCT10.9523809523809524No Hit
GAGATCGGCATTACCGTATCGGCGGGCGTTGCGCCCAACAAGTTCATCGC10.9523809523809524No Hit
ATCAGCTCCCAGCCCAGTCGCTGCGCGAGTCGCTCGCATACGGTGATCGA10.9523809523809524No Hit
CCACTGACTTGTCTCACCTAAATGATTGCACCAGTTCCTGATTTGATCAG10.9523809523809524No Hit
GTTTGGAAGGCTCAGTAGAAGACAGGAAAATGTGGGAAAGTTTGGAACTT10.9523809523809524No Hit
GGGCGCGGAAGCGCAGATCCAGGGCGCGTGCGTGTTCGGTCTGGCGATGA10.9523809523809524No Hit
GGGTGAAGATCAGGCCGAAGATGGTCACTCCGAGCATTCCGAAACTCACT10.9523809523809524No Hit
CCTTCCAACGCCTCATGCGAGGCATCCTGGCGGCTTAGGAGGCCAGGCAT10.9523809523809524No Hit
ATCTTCAATATTACATTTAGCTAACTTAATTTTCCATGGATCAAATTATT10.9523809523809524No Hit
GGGCAGTATTACGTGCTGGACTACAAATCCAATACCCTGGGCGAGGATGA10.9523809523809524No Hit
ACTACCAGGCGACGCCCGGACAGGTGCGCGGCCAGTATGTGCTGGCCGAC10.9523809523809524No Hit
CTCCTGGTCCGCCTTGGACTTTGGCTCAACCGCAACCGAAATGACCGGCT10.9523809523809524No Hit
CTCTAATCTTGACTGCTCCCCCACCCATTTCAATTCAACTTCCAAGGGGC10.9523809523809524No Hit
GCGGGACTGGAACGGCGGCCAGTACAGCATCGTCGATCTGGGCCCCGAGA10.9523809523809524No Hit
ACGTTCTTCAATCTTATCAATGTTTTGATTTTTAAGGACTGAAATACTGA10.9523809523809524No Hit
GCCTGTGCTGCCGCATGTGAAAAGCATGCCAAAGAGCGGGATAATTAACC10.9523809523809524No Hit
AGCCTGAGCAACATAGGAAGACTCCATCTCTACAAAAAAATAAAATTTAG10.9523809523809524No Hit
GCATTTTCCTTATCGTCTTCCAAAAGCTGAAAATCTCCATAAGAATGCTG10.9523809523809524No Hit
GGTGGGGTGTCAAAGCCACCATTTCCACCTGGTTCGGGCTAATTCTGACA10.9523809523809524No Hit
GTAGTCGACCGCGTCCCCGCCGACCTCGGGCAGGGACGTCAGGCGCGTCG10.9523809523809524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)