FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGGTGTCGTGGTGGCCGTCGGCAGTTGCGCGGCCTGGGGTGGCATCACG34.918032786885246No Hit
CGTGAGTACGCTGCAGCAGGAGATCCGGCGCCGCCGGACGTTCGCCATCA34.918032786885246No Hit
TCAGCAGGCTCATGTTGTGCAGGATGCGCTCGACGACCTTGTTCTCCCAG34.918032786885246No Hit
GGCGGATACCCCACTGCTTCAGCAAGCCGCGTACCGCGCCAGGAGGTCCG23.278688524590164No Hit
GTACGAGACATTCTGGTCGGCACGCACCGCGCCCATCAGCACGCCGGTGT23.278688524590164No Hit
CAGGATGACCGGTCGGTCGCCGGGCTTGACCTTGCAGGAGAAGTCGTTCA23.278688524590164No Hit
ACCATGCGCCGCGCCGTGGCGGTTGGCTCATCTGGGTGGCGCTGGTCGCG23.278688524590164No Hit
ATCATGGGCAGGTAGACGTCGTGCTCCTCGAAGCGGAACAGCGACATCGG23.278688524590164No Hit
CGCCCAAAAACTGCGCGAGTTGCAGCCGATGCCCGAACGCAACAATGTCC23.278688524590164No Hit
GGGTACAACATGGGCGAAGGCGGTGGAGCGCTGAGAAGCGCCTGCGTCAG23.278688524590164No Hit
CGTTCAACGATGCGATGAAGTTCGTGCGCTCGCTGGCGGCCAAGCGCGGC23.278688524590164No Hit
AGGGAGCAGGTCTCGACGCCTGAGTTCGTCGAGCGGCTGGCCAGGGCATA11.639344262295082No Hit
CTCGTGCTGGCGGCCGACGTGGCCGACGAGGCCCAGGTCGATGTGGCCTT11.639344262295082No Hit
GTGTAAGGACGGTAGCAATAAAGCGCCTTAAGAATGCTGTATAGAACTGA11.639344262295082No Hit
CGACTATGCGGTCCGGGCGCGGCGGCTTACCCGGAAATTTGGCGAGCGCA11.639344262295082No Hit
AATAAGGGTAACCAGTCGTTTGCATAACCTTCGGCAAAGGCCATCGCCAG11.639344262295082No Hit
CTGCATGAGCGGCTGGTCGGCCAGCAGGGCACCGAAGGCCGAGCGGTGCC11.639344262295082No Hit
ATCTTGCTTGGGCGATGACGACGTATCTCGGCGACTATCCGGAGGCTCTG11.639344262295082No Hit
GCCGTCCGCTGCGTCCGCAACGCGCGCCGAGCTGGCCGCCGAGCGGGCGG11.639344262295082No Hit
TGCCATGCGTGCCGATGCAGGGCAGGAAAAGAAGCGCGCCATCGTCGCCG11.639344262295082No Hit
TATGGAACGTGGCCACCAGCGAGCCGTACGGCACCAGGCGCCGATCCGTG11.639344262295082No Hit
TTGCTACGCGGGTCCCCTTCAAGACGGGTTCACCGGGTGCTTACCGTTCA11.639344262295082No Hit
GCTGTTTACGCCGGAAACAATGGAGCCGAAAAAGTTTCTGCACTTTGGTT11.639344262295082No Hit
CGGCGTGCGCTCAACGCCTTGCTGGCGTCGGACGTTCGCCGATAGAAACA11.639344262295082No Hit
CTGCTGCTGTCTTCCGACCAAGCGTGGTTCCTGCGCGAAAACCTCAAGCT11.639344262295082No Hit
ATCGAAGAGAGCGCGCCAATACGGCGCCGACGTCGGCATAGCGCCGAGTT11.639344262295082No Hit
AATAAGGGTAACCAGTCGTTGGCAGAACCTTCGGCAAAGGCCATCGCCAG11.639344262295082No Hit
CGCCACAGGTGTCTATCCGAAATTTGCCGAAAGACTGCGCGTGTTCGGGG11.639344262295082No Hit
CTTGTAACGCTTGCTGCGCCAGGTGATTGAGAGGCAATCAGCGGGGGCGG11.639344262295082No Hit
ACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGC11.639344262295082No Hit
GCGTATCCAAGTTGAAGGACATGGTTGTTCTTGGTCGGATGCGTACCGAG11.639344262295082No Hit
CTTCTGAACCGGAAGCGATCGGCCGCATGCCGCCACCCTCGGCGCGCTGT11.639344262295082No Hit
CCTTTTCGGCGCGCTTGGCGCGCTCGGCCTCGGCCACGCCGGCGGCCTCC11.639344262295082No Hit
CCTGTCGGAAACCACGCGCCTCACGCACCGCGTGATGGACCTGCGCCGCC11.639344262295082No Hit
GGCTTGCTACGACGGCGAAAACGTCGCGCTGCTGCTGCAATCGATGCCGT11.639344262295082No Hit
ACCTTGTCGACGGGCGAAACCGGTTGCAGCGGATTCGGATTGCCCTTCAG11.639344262295082No Hit
CAGGTCTTCCGGCTTGACCGTGTCGAGTTGCTTCTTTTTCGCCTTCATGA11.639344262295082No Hit
GTGCAGTTCGGCGCGGTGCCGATGGCCGCGCGCCGCAATTTCCTCGGCGA11.639344262295082No Hit
GAGAAGTACGCCACGTTCTGGCAGAACTTCGGTCAGGTGCTCAAGGAGGG11.639344262295082No Hit
CGCGATGGCCGATCAGCCCGCTGACGGCCAGCAGCGGCAGCCCGACGAAG11.639344262295082No Hit
ATGCAGCGTTGCAAGGCGATGACGCCAAGCTATGGCAATTCAGCGTTGAC11.639344262295082No Hit
TGCCCGCCCAGCGTGCCGCGCGCCACCACGACGCCATCATCGGCCTGCGT11.639344262295082No Hit
GGGCAGGCCCCAGGCGCGGGTGGCGGCGCCGGGGAGGTCGTTCCAGGTCA11.639344262295082No Hit
GGTCAAGAGGGCCTTACCCAAGTCAATAGGCAGACCGTGCAGCAGCGCGG11.639344262295082No Hit
GTTCGTGGTCATCGCAAGCTGGGGCACAGTTCGCAGAGGTTCGCGTGCCC11.639344262295082No Hit
GGCTGATGTGTCCACCATGTGGATGCAGGCGTTCGTGCCGGAAGCCGATG11.639344262295082No Hit
CGCTGACCTGCGCGAGCTCACGGCAGCATGGCGCGGGGATGACATCACCG11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)