FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCATCCAGTCGGAGGTGGCGTGGCGGTTGGCTTTACGTGCGCGCACG34.918032786885246No Hit
CGCTTCGACTTCGACCCCGCGCCGGCTCTCGAAACCCTGATGCTGCACTT34.918032786885246No Hit
GTGCACGAGCTGGTCGGCATACAGGCGCGGCCGGCCGAGCGCATCGAGCG23.278688524590164No Hit
CACCTATTTATATCGCCATTCAGGCAATCCCTGACGGTACGGGCAAAAAT23.278688524590164No Hit
GCGATGTCGCGCTGGAACAGCAGGGCTTCCTTCTTGATCGCGGGCTGGGT23.278688524590164No Hit
GTCTTGATTGGCCTGCTCCAGCGCTGCCTGGCGATCGCGCGTTTCAGCGG23.278688524590164No Hit
GTCCTGATGGCTGCCGCGCCGACTGCGCAGGCTGTTACTTCGCCGGGGGA23.278688524590164No Hit
GTCTATGCTGGTATCGCTGAGCCTGACGCCGGTGCTGTGCGTGATGCTGC23.278688524590164No Hit
GATGTACATCCTCCTCTATGGCGCCATCCAGCGGCTGCCGACGCATCTGA23.278688524590164No Hit
ATGTTCTGATGCACGACCCGATGTCGCTGTTCCGCTTCGAGGAGCACGAC23.278688524590164No Hit
GTGCTCAGCCTGTCGGTGGGCGTGACGCTGGCCGACGCGCAACGCGCGAT23.278688524590164No Hit
TCCTGAACGCGCGGCTGACCGAAATTCTGATTGGCCAGCAATACTCGCCC11.639344262295082No Hit
GTCTCATAGACTCCCAGCAGAACCGTCGCCTTCTTCTTCCTTGCCAACTC11.639344262295082No Hit
ACTGCAGTGTCTGACCTTCGCCCTGCCACTCGAAGTTGGCCATCCACTGC11.639344262295082No Hit
GTAGAGGACGCGTGCCCATCCGGTCCACTTCTCGGCCGGCAAGATTCCTG11.639344262295082No Hit
GACCTTTGGCGTGTCGCGCATGACGGTCAACCGCGCGCTGCGTGAGTTGA11.639344262295082No Hit
GTCGCGCGCCTCGTGCGGCAGGCCGCGGCCGCGGGTGTCGCGCAGCATCA11.639344262295082No Hit
CCAGGAAACCGTTGCCAACGTGGTTTCAAAGGTGCCGGATTCCCAGGTGG11.639344262295082No Hit
GCTGTGGGGCCTGTGGGGCTTGCTGCTTGGGACATCGATCACGGCGATGA11.639344262295082No Hit
TTGTAGAGCTGGGGCGACTGCGGCAGCGCGAAGAACTGACCGTCGTGCAC11.639344262295082No Hit
CGCCAGCAGCGCGCCCGACATGGCACGACCGACGATGAGGCCGATGACGG11.639344262295082No Hit
CAGCGTATCAGCGCGCCCCAGATCGGCGCGGAACACGGCTTCATTGCGCG11.639344262295082No Hit
GCCGACGACGGCGGCGATGACAGCAGCGGCAGCTCCGGCCGCGCGCATGC11.639344262295082No Hit
GGCCTGGAAACCCTGTCGGTCAAGCTGCCGGCCGTGGTCACCACCGACCT11.639344262295082No Hit
GCAGAATGCGTGTCGGCTTCCTCAAGCAATCTAGCGAGCCTGACCGCAAC11.639344262295082No Hit
CCCGTTCTTCGGCGTCCGGCGCGGCAAACCAGTCGCGCATATGTGTCGCG11.639344262295082No Hit
ACCCGATTGAACGCGATAGCTTTATCGAACGCGATGCGCGCCGACGCGCG11.639344262295082No Hit
GTGGTAGTTGTTCCACCACTGGTAGACCCCCTCGATGCAGAGTACGATGG11.639344262295082No Hit
GATGAGCGCGCGCTCGCGGTCGATGCTGTTGCCGGCGGTGCAGCAGTAGA11.639344262295082No Hit
GTGTTGGCTGCGTGGTGGTGTTTGAATCTGCGCGGATGCTGTTGGCGACA11.639344262295082No Hit
CTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCG11.639344262295082No Hit
GGTTCACACTTAACGCATCAGTAGACGTCTTGAACTCTTCGCCCACGCAT11.639344262295082No Hit
CTGCTGGGCCAGAGCGGCTCGGGCAAGAGCACGCTGCTGCGCATCATGGC11.639344262295082No Hit
ACCGACGACGGCGGCGATGACAGCAGCGGCAGCTCCGGCCGCGCGCATGC11.639344262295082No Hit
ATGCACTCCTGCACTGCCTTGGCCTTGAACTCGGCGCTATGCCGACGTCG11.639344262295082No Hit
CACTACGAGGCCAGGAGGTTGCAAGAGGAGGTGCTTGCGGATGAAACCGC11.639344262295082No Hit
GCCAGCGCCTGTTCGCGCTTCACCAGCGGCTCCAGCGCGTCGTGGCGCCG11.639344262295082No Hit
CGTCCCTCGGGTGCTGCCCGACGGCACGCGCAACGTGTTCCACGTGCAAC11.639344262295082No Hit
GCACCGAGCGGTTGTCCGCCACTTCCAGAACGCCATCGCCGTCGACATCC11.639344262295082No Hit
GGAGCACCCCCGCATCTGCCAATCGGTGGGGATAGCCCCCGTACGGACAC11.639344262295082No Hit
CCAGGATGCGGTGCGTGTTGGCGTCGACCGATGCACCCACGGTGGTGATC11.639344262295082No Hit
AGATGGAACCGTTGTTGACGATGCGGCCGCCGCGCGGCGCCTGCGCCTTC11.639344262295082No Hit
GTCACGTAGTAGATCTTGTCCTGACCTTCCTTCATGCGGCCGACGTAATC11.639344262295082No Hit
TCGTCGGGCCGGTCACCGGTGCGGCGCTCGGTGCCACCTCCGATGTGATG11.639344262295082No Hit
CAATGAAGGCCCATTTGATGATGTGCCGGCACTGTTCGAACTTCAAGAAG11.639344262295082No Hit
GTGCACGAGATGGTCGGCATACAGGCGAGGCCGGCCGAGCGCAACGAGCG11.639344262295082No Hit
CAACTCAATTTGTTGCTGACTGTACACGCCATCGTCACCGTCCGCGACGG11.639344262295082No Hit
AAGTTGAGAAAACCAAAAGGCCGAAATTGACCAAGAAATAATTGGCTTTG11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)