FastQCFastQC Report
Tue 10 May 2022
EGAF00003631223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8000
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGGCATGGACGAGCTGGTGAACCAGGCCGCCAAGAACCGCTTCATGT150.1875No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG140.17500000000000002No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT130.1625No Hit
TCTTTAAAGGCTGCAGCGTCGTCCTCAAATTTCGCACTGACCATAATGTG120.15No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT100.125No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG100.125No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC100.125No Hit
GTGCTGTCGTCGTGCGCGCGCACCGGCCGGCTGCTGGTGGTCCACGAGGC90.11249999999999999No Hit
GAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACC90.11249999999999999No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)