FastQCFastQC Report
Tue 10 May 2022
EGAF00003631224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8000
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG130.1625No Hit
GTATCGGCTTCTATGGCGAATGACAGTGGAAAGCTGTGTGTTGATTTCAT120.15No Hit
GTGCTGTCGTCGTGCGCGCGCACCGGCCGGCTGCTGGTGGTCCACGAGGC100.125No Hit
GTCCGGCACCGTCCAGGCGTCGCCGCCGCCCTCGCTGCTGAAGTCGATAT100.125No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC100.125No Hit
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG90.11249999999999999No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT90.11249999999999999No Hit
CAGTAGGATTTATTCAGGATCTTCCGACGACATTGATTGCTGCATTCCGC90.11249999999999999No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)