FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCACGTACTTCGACGATCCGGAATTCGCCACCCGTGGCCGGCGCGTGCG34.545454545454546No Hit
TAGTGGTCGGGGCCGCCAACGGCCAGGCTGGCCTCGAGCAGGCGGCCCGA34.545454545454546No Hit
GTTCGGGGTGCTGCGCTGCGATCAGCGCGGGCGACGCGCGGCATCGGCCG34.545454545454546No Hit
ATTGATGAACAGCGTGATCCCCATGCCTCGCCAATGCTGGCGCACCTGGC34.545454545454546No Hit
GCGATGGTCACCGATGACCTTGCGGCTGATCTCGACCAAGCCGGCTAGGG23.0303030303030303No Hit
TCATACAACCGCATGGCGGTCGCGTTGGTTTCGTGTGTCTGCCAATAGAC23.0303030303030303No Hit
CCTCCCGGTTGCGTGGGAAGCCTGCAGCGCCAAGGTGGAGGGGAAGGATA23.0303030303030303No Hit
GGCTGCGCCGCGCCTCTGCTTTGGCCTCGTCCACCAGGCCAGCGGCGAGA23.0303030303030303No Hit
GAAAGAGGGCACGGGACCCTCAGAACCCCAGCTTCTGAAGCCAGGGCTAA23.0303030303030303No Hit
CTTGCAGCTGGTACGGAACCGAGCGGCGCTTGCGTTGAGCAACTACCGAT23.0303030303030303No Hit
TCGCCGACCCGCTTCAGCAGGTCGTCCACCTCCCAGTGATCGTCCGCATG23.0303030303030303No Hit
GATCATGAAGGACGCCGGCGAGAAGTTCGACCCGAAGGCCTATGTGCCGG23.0303030303030303No Hit
CTGGAAAGCCGTTGGCGCATACAACGCCACTTCACCGGACAAGCAGTTGC23.0303030303030303No Hit
GCCAGCAACGTGCGAACTGGGCTCGCGCCCTGTCCACCGCCCAGCTGGCC23.0303030303030303No Hit
CGGATCAGATGATCGAACGCCGACAATGCGGCCTTCGCGCCATCGCCGGT11.5151515151515151No Hit
TCTTCGTTGAGCAGCACGAGGCCGCAGGATAGGGCGATCGGCATGCTATT11.5151515151515151No Hit
CGGCGACGTCGGTGAGGAACAGCCACGCCTTCATGGTCGGGTGGAACGTG11.5151515151515151No Hit
TCGCAAGACCTACGCCATCGGTCTGCTGACCGACTCCGTCGACAATCCGT11.5151515151515151No Hit
CGATTGAAGATCAGCCTGGCCTCCGGATAGCGTGCCTTGATGGCGCGAAT11.5151515151515151No Hit
GTGCGCGAGCTGTCGGCGATTCGGTAGCAGCCCCTGTCGCGCGAGGCGTG11.5151515151515151No Hit
TCGTCAGGGCGAACGGCACGTCGAGCTTGGCGGTCTCCGCGGCCCACAGG11.5151515151515151No Hit
GTAAACTAGATACGGAATTTTCTCTTTAAATTCAATGGTTTGTGAAAATT11.5151515151515151No Hit
CCTGGTGTGCGCAGCCTGGCAATACTCGCCCTGCTGGCAATCATTCACGC11.5151515151515151No Hit
GGCATAGAGAGCCTCGAGAGTCATGTCATGGGCGCTGACAGCTCCGCCCT11.5151515151515151No Hit
ACACTCTAATGGGTGAAAGCGGCTGCTGGAAACTTGACCTGAACAAATCC11.5151515151515151No Hit
ATCAGCGTGTCCCCTTCACGAAGCGCCTTCAGGCAAGCAGCCAACCCTGG11.5151515151515151No Hit
CACCTTTTCGATCTGCAGCGGCATGAAGCGGTTGTAGATGGCCGTGACAT11.5151515151515151No Hit
CCGTCTGCCAGGCGATCCTTGTCGAGATCGCGACCGATCACGACGTATTC11.5151515151515151No Hit
CCATTGACCTTGAGCATCTCCTTGCGGCGACCGAGATAGTGGACGTAGCC11.5151515151515151No Hit
TTCTTGATCCGATCAGCGCTGCGGCGGCTTCTGCTGCGCAGCCAGCGCAT11.5151515151515151No Hit
GTGGATCGCATGCTCGCCAAGTTTCCGGATGCGGATGTCGTCTTCATTGA11.5151515151515151No Hit
GCTGCTGGCCGACGCGCCCATCGAGACCTGGAAGGATTACCTGACCTTCC11.5151515151515151No Hit
ATGTTCTTCGAGCGCGGTGAATCTGACCTGATCCGGCGCGTCGAGGCGCG11.5151515151515151No Hit
TCACGAACGCGATGCCGGGCATCGGCGGCTTCGATGGACCGCGCGGCCGC11.5151515151515151No Hit
GGCCATTCCGGCGGTGCTCGGCTACAACGCCCTCACGCGGGGCAACAAGG11.5151515151515151No Hit
GACCAGCCCGAGGTATTCCCCGTCAACTACGTCGTTGACGGACAGAGCAT11.5151515151515151No Hit
CCTTTCTGATCCTGTTGATTCTCGTCTCCATCGCTTTCGGCTGGATATTG11.5151515151515151No Hit
CGCCTACCCCACCCAAACCACCTTCACCGCCGCACCGGACGGCAAGCTGG11.5151515151515151No Hit
GTCTACAGCAAGCAGCCGACCCGCCATGGCACGGTAGAGATGGCCAACCT11.5151515151515151No Hit
CTAAAGCGAGAGCGACCATGGCCGACATCCTCGACTTCGAAGAAGCAAAA11.5151515151515151No Hit
CGCAATCGCTGCATGGCCGCCGGCCTGGCACGGACAAAATCTGCGCGACA11.5151515151515151No Hit
ATGCAGCGCCATCGGGTCCTGAACCTAATGACCCATGTTGATCCTTGGCG11.5151515151515151No Hit
TGGTATGAATGAAACTAACAGTGCTAGTGATAAAAAAAAAAATGTAAAGA11.5151515151515151No Hit
GGTCGAGACCGGCAGCGCGCTGGCCGAACGCGCGGGCAGCACGATGGAAG11.5151515151515151No Hit
GCGACACAGATTGCGGGTTGGGCTTGAATCAGTTCGACAGCGAGTCCGTC11.5151515151515151No Hit
GTCCGGCGCCGGTGCTGATGGGGCCGATGTCCTCTGGTTTTGCGGTGGAA11.5151515151515151No Hit
ATGTTCTCGGGCGTCATCGCAATGAGGAGCAGCAGGGTCGGTTGCATGGG11.5151515151515151No Hit
CCGCAGAGGCCTCCTGCAGCTTGAACCGGAACGACAGCGCCGGGCGGACG11.5151515151515151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)