FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGGCTGCCGTGGAAGGCTCCTTGGAACGACAAAGCAAGGCGTTCTTC34.545454545454546No Hit
CAGTTACCTGGCGGCGCTGCCGCTAACGCCGGACGCCATCCACTGGTTGC34.545454545454546No Hit
GGCGATCGTTGCCGCCATCGTGGCGGTATTCGGCATCGTCGGGCTGCGGC34.545454545454546No Hit
GCACAGAAGGCTGACAGTCGACCGACCTCCCCCTTGTAGGCGGTCCTGGC34.545454545454546No Hit
GAGACCTTCGGGTCTGCCGGTAGCTGGGATAGGGCCGGTCTGCTAACGCC23.0303030303030303No Hit
CGCAGACGACATGGCAGCGCTTCTTCGACGAAACGGAGCCGGTGCACGCG23.0303030303030303No Hit
CCGAGAAGCTCTCCAGATGCACCCATGACTGCCAGTCGGTCGTGTAACCG23.0303030303030303No Hit
CACGCACAGAGCCCAGCGCAGAACGGCCCTCAGCTTATTGAGCGAATGAG23.0303030303030303No Hit
GAGCGGCAGCGCGCCTTTCCGCGTTTGAAAAAGTCCTTCCTCTCCGGCGC23.0303030303030303No Hit
GACCGCCACGTGGTATCGGCATCTGCATGAGAAAACAGCGAGCGCGCGCT23.0303030303030303No Hit
ATTTGAGGGAACGGACGTGACTGACACTGCTGGTTCAGGTGAGGTACTCG23.0303030303030303No Hit
CGTGCGCATACCGAGCGACGGCGAGCCCTACCTGCACCTGCAGTTCCGCC23.0303030303030303No Hit
GAACTTCTGGGCCGGCACCATCGGGTCGTACCAATACAGCACCTTGCGCT23.0303030303030303No Hit
GCATGAGCAGATCCCGCGATTTGAGCCCCGGCGGGGCGCAGTAGGAGATG23.0303030303030303No Hit
GGCTTGGCGCACGGCGGCGCATTGAATTCGTAGTCTGTAACAGCAATAAA11.5151515151515151No Hit
GACCACCGAGATCACCGGTGACGGCCAGAAGGTCAATGGCCTGCGCTACA11.5151515151515151No Hit
GGTTTGTTGGACGCGCGCGGCAGGTCGATCTTCACCGCGTGGTTGATCAC11.5151515151515151No Hit
CGATTCTTGCGCTCGGCGGCACGCACTGGGAAGCGGCGCGCAATGCAGCA11.5151515151515151No Hit
GATCGCCAGCGTGGCCAGCGCCGCCCAGTTGCGCCGCTGATGCATGCGCG11.5151515151515151No Hit
GGCCAGGCGGCGCATGATTTCCATCTGGAACAGCCGGTCCTGGGCATGCA11.5151515151515151No Hit
GCGTGGCTTCGTCCATCAGCGTGACAGCCTTGTTGACCTGTTCGATGCCC11.5151515151515151No Hit
TCACAGTACTCGACGTTGCGCAACAGTTCGCCGTAGGTGTTGGGCTTGGC11.5151515151515151No Hit
GGACCGGCGTCTCTCCAGGCATACCGGAAAGGAAACGACCTTCCGAGTTC11.5151515151515151No Hit
TCGGTGAAGAGAATCCAGTCGCGGACTTTCTTCGGCAAATCGCGCCACGG11.5151515151515151No Hit
GCGCTCTTTCCGGGGCGCTTGTTGCCGGGTGCGCGATTGCCATCACGCAT11.5151515151515151No Hit
CGTTGCTATCTGGGTGAAGGACATTCAGTGGCACATCCGCTTTTTCGAAG11.5151515151515151No Hit
GCGACATACGGGCGTGTCGTCATTTGTGAAGAAGCTGAACCCCGAATACC11.5151515151515151No Hit
CTCAGCCTCCTGAGTAGCTGGAAATACAAACATGTGCCACTGTGTCTGAC11.5151515151515151No Hit
GTCGCCTGGAAGGCCGCTACGCCGTGCGCTTCGTCAACGGCAACACGCTG11.5151515151515151No Hit
CTGCGCAGCACCTCCCCCGGCCTGTGGGCCGCGGAGACCGCCAAGCTCGA11.5151515151515151No Hit
GCTCTGGCCGACGATTCAGCAGTAGGTGTTTGGCGCGGCGCGGACGACGT11.5151515151515151No Hit
AGACCACCTCGTCGCCGCCCTTGCCGCGCGGCGGCTGGAAGCCCACCGCG11.5151515151515151No Hit
CCGGAGCACCGTGGCAATGGGTCGAGAATGAATCGACGGGTTGCGGTTGG11.5151515151515151No Hit
CTACGGTGCGCAAGGTATCACCCCTGGATGAGTGGCGACGTGAGGAAGCG11.5151515151515151No Hit
ACATAATCGAACGTATACGTGACGGGTGAAAAGGTGCTGATAGGCTACAT11.5151515151515151No Hit
GCCCTTGACCGGCGCCACGTCCAGGCCGATGTCCGGGAAGATGGTCGAGC11.5151515151515151No Hit
CTTCAACTGCGAGCCGATCCTGACCGTGCAGACGATCCTGTCGCACGTCA11.5151515151515151No Hit
GCTTGCCCATCTTGGCGAGCTGCCGGTTGTACTCGAACTCCGCCGCACGG11.5151515151515151No Hit
GATCAGCCTCGACACGAACGTACTTGCGCTTAACAGTAGGAACCCAGGGG11.5151515151515151No Hit
GATGATGAGCAGGTCCGACTTGGTGATGCCCGGGCCGCCCTTGCGCGGGA11.5151515151515151No Hit
GCCTTCGCGCGCGAACAGGAGCCCCGCGACAGGGAGGCCTATGCCTATGC11.5151515151515151No Hit
ATTCAATGCGGCTCGAGCGGTATTGCCGCCGCGTCGGCGAGAGCGACGAT11.5151515151515151No Hit
CTCGAATCCTATCAGTTGGTGGCAAAGGACAACGCCTCACGTGACGCCCA11.5151515151515151No Hit
GAGTTGCTCAACGACCACGAGCACGAGCACGATCCTGCCATCACCTCGGT11.5151515151515151No Hit
GGCAGTCTGTTCTGCGGCCCGCGGCCATGCGCCTCCTGCCGCAAAGTCTA11.5151515151515151No Hit
GGCGACGTGATGTGGCGTTTTCAATCCGAATGGCCGGCGTTGATCGAAGC11.5151515151515151No Hit
CGCGAAGGCGAGGTAGTGCCACGCCAGCCCTGCTTCCAGGAGCGCCAAGC11.5151515151515151No Hit
GTCGACGAACACGATCGGTGTGCCCTGTTCCCGCTCGTGCTGCAGGTACC11.5151515151515151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)