FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003631257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTTGGCAAGGGACTTCCTGTAACAACGCATCTCATATTTGGAATGACT28.695652173913043No Hit
GAGACAGTTTCCCGTGGGAGGGAGTAGGTGTGGTCATGGTGGACAAGGCA28.695652173913043No Hit
AAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGG14.3478260869565215No Hit
GTCCAGGATTATGAAACCTAAACCTCCCATTGTAAATAGGAAGCTGGATG14.3478260869565215No Hit
GCTGTGAGAGACATATCAGAGCCCTGGGCACTGTCACTGCTTGCAGCCTG14.3478260869565215No Hit
TTTTAATATTGATATGCTTATACACTTACACTTTATGCACAAAATGTAGG14.3478260869565215No Hit
TCCTAGTCCTGTATGCCCTTTTCCTAACACTCACAACAAAACTAACTAAT14.3478260869565215No Hit
CCCTGAAGTACCCCATCGAGCACGGCATCGTCACCAACTGGGACGACATG14.3478260869565215No Hit
AATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTT14.3478260869565215No Hit
AGCCTGTGCCTGCTGGGGTGCATAGCGGGCTGCTGCTTCATCCCCTTCTG14.3478260869565215No Hit
CAGAAAGTTCTTCACCTTCATCTCTTCCTCGGGATGTCTGTCAGGGTTCA14.3478260869565215No Hit
CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGA14.3478260869565215No Hit
CCCACGGACACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCA14.3478260869565215No Hit
GGCCCATATAATGAATTATGTATGAAGGCTTGTGCTGCTTGTTGCCTTGA14.3478260869565215No Hit
GGCAAAGATCAGAGGGACATCCCCACTCTGGTAAGACAACCGCTTGAGGC14.3478260869565215No Hit
CCCCTGACTTTCTCCTTGGATCTGTAACCGGACTTTAGCAGTATCCAGAG14.3478260869565215No Hit
ACATGAAGGTGCTCCTTGCCGCCGCCCTCATCGCGGGGTCCGTCTTCTTC14.3478260869565215No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG14.3478260869565215No Hit
GAACATGCCTCTCGCAAAGGATCTCCTTCATCCCTCTCCAGAAGAGGAGA14.3478260869565215No Hit
CATCCAGGTATAATGATGCGTGGGCCTCCTCTACTACTGGACATGGGCTT14.3478260869565215No Hit
CATTCAAATGAGCATCCTAGTCACCGCGTTTAAAATGAACCTGCCGGCTG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)