FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003631258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCTGGGGCTCGTGTCTGGGCTTCGGACGTTGGGGCCCGGTGGCCCACC28.695652173913043No Hit
TTGCTCCTCCTGAGCGCAAGTACTCCGTGTGGATCGGCGGCTCCATCCTG28.695652173913043No Hit
CAACCAGAGCGAGGCCGGTTCTCACACCATCCAGCTGATGTATGGCTGCG14.3478260869565215No Hit
GTAAATGGGCGGTTTACGGGAGGCGCGTGGGGCTAGAGGCCGAGAACGGC14.3478260869565215No Hit
GTGGCTCGCCTCGCGGCGGACCGCCCGCCCGCTCCCAAGATCCAACTACG14.3478260869565215No Hit
GGTTCTAGGAATAATGGGGGAAGTATGTAGGAGTTGAAGATTAGTCCGCC14.3478260869565215No Hit
CTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGACGACGACCCAT14.3478260869565215No Hit
ACCGTGCGCAGGGATAAAACGCTCCTGAAGGAGAAGAGGACGCGACGCGA14.3478260869565215No Hit
AGTCAGGTCCCGGCCAGCCAGGTCCAGACGCAGGATGGCATGGGGGAGGG14.3478260869565215No Hit
CTCTGTTGTTTTATTCCTGCTCTGTTGAATGTCCACACTGCATTTTTCTA14.3478260869565215No Hit
ATACGCGATGGATCGAGGTCATGACTGGACACTGCATCGGAAGACACTTC14.3478260869565215No Hit
GTCCCAGGGTCCCCGCCGGCAGAGCCGCTTGGGTGGCTGACCGTCGTCCT14.3478260869565215No Hit
CCACCTTCCGCACCACCTCCATGCCCTCTAGAACTTTGCCCAAACACCAC14.3478260869565215No Hit
GGAAACCAGGTGGAGTGACTTGCCCCAGATCATATAGTGAGAAACAGAAC14.3478260869565215No Hit
GCAGATCACAGGAAGATATTCGGATAGGGCAATGATCACAGTTAGATGGC14.3478260869565215No Hit
CTTAACTATCTTAACAAGCTTTGAGTGCAAGAGATTGAAGAGTTCAAATC14.3478260869565215No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACT14.3478260869565215No Hit
GTGTTTATTGAGATGGTTTCCCACTCATCTTGACTCAGAGTGCTTTTAGT14.3478260869565215No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT14.3478260869565215No Hit
GACACATAGTATGACCATTAGGTGTTTCGTCTCCCACCCATTTTCTATGG14.3478260869565215No Hit
GGGCCAGCCCGTCACCCCGCTGCTGAGTCCTGGCCAGGCCAGCTCCCCAG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)