FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003631398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAGCGGCTCTGTGACACCCTTTTTGTGATCTTCAGTGCTGTTTTTA27.4074074074074066No Hit
GACCATCACCCTTGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGG27.4074074074074066No Hit
ACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAAC27.4074074074074066No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA27.4074074074074066No Hit
GTCCTGAGCTACTGACCTCAAGTGATTTGCCCTTCTGGGCCTCCCAAAGT27.4074074074074066No Hit
CTACTGCACCCCTGGTTTGAGTCCGTCTTGGAACCCGGGTACATCGACTC27.4074074074074066No Hit
GTGGTGCATGATGCCCAAGGTGGGGAACACCCAGGTACTGGCTGGGGGCA13.7037037037037033No Hit
CCTAAGGAGAGTAAACCCCAAGCAGGCACTGCCCGCCCACAGGATGTGAA13.7037037037037033No Hit
GGTTATTGGTTGAATTCCCAGCAACAGGTGGTGTGATTCCATCTTGGCAA13.7037037037037033No Hit
GTACTGGACCGGGTTGCTGAAAAGACTCACACCCGAATAAGAAGCCTTTT13.7037037037037033No Hit
CACAACCGCAGCGAGGAGTTTCTCATTGCTGGAAAACTGCAGGATGGACT13.7037037037037033No Hit
GATCAAGCGCAACTCCACCATCCCCACCAAGCAGACGCAGATCTTCACCA13.7037037037037033No Hit
GTTTTTATCTTCTAATTTCCCTATCTTCTCTATTCTTTTCTTCGCCTTCC13.7037037037037033No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA13.7037037037037033No Hit
GGAAGGGGGTCATGGTAGACACAGAGGTGGACTGTTTCTCTACCTCCTCA13.7037037037037033No Hit
TGGTCGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGA13.7037037037037033No Hit
ACAAAGTGCTTTAAAAAAAAAAGACCTTGTGACATATTCAAACCATATTT13.7037037037037033No Hit
ATTTGACTCAACACGGGAAACCTCACCCGGCTCGGACACGGACAGGATTG13.7037037037037033No Hit
GTCTTCTGGGTGGCAGTGATGGCATGGACTGTGGTCATGAGTCCTTCCAC13.7037037037037033No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGATCCAAT13.7037037037037033No Hit
TCCCAAAGGTTTCTTTCAGCTGGATTAAGCCTCCAACTCCAGGGCGAGCC13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)