FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCGCGTCTGGCGCTGGACGTAGCGTCCATCCTGCTGCATGACCCACGC44.123711340206185No Hit
ACCTCGGCTACCCGGGCCTCGTCGAGGGCGGTCCCGCTGATTTCCTCATC33.0927835051546393No Hit
GTCTACAGGATGGGCGCGAACAGCTTGGCCACGTGCATGATCACGCGGCG33.0927835051546393No Hit
CACCACGATGTAGTCGAACTTGAAGCCCAGCTCCGCTTCCTGCTGGCGCA33.0927835051546393No Hit
CGCAGGGGTAGTGAATCCGCCAGGATTGACTTGCGCTGCCCTACCTCTCA22.0618556701030926No Hit
CATATAATTTTGAAACTTTACTATCAATCTTTCCTACCAAAGTGTGGGTA22.0618556701030926No Hit
GCTCGGCGGCGGCGGCGGCCAGCGAGGGCTCGACGAAGCCCTGCACGACG22.0618556701030926No Hit
GGATGACCGTCTTGCCAAGCCGCTGGACCAGCTTGAGGGCGCATTCCACC22.0618556701030926No Hit
AGTATAAATTCAGAGGTCCTCCCTCCTTTAATAACACACCTACTCCACCT22.0618556701030926No Hit
GGCACGCCCACCCCGCCTACGCGCTGGTGGTGGCCGCCAACCTGGACGAA22.0618556701030926No Hit
GATTGCGGTGACGGCCATGCTGTTGCTCGTGCAGGGGATGCGGCAGTTCT22.0618556701030926No Hit
GGTAAAAGTGGTGCAGAATGTTCAGAAAATGAGGGGAGGTCATATGGCGG22.0618556701030926No Hit
GTGAAGGACCGCCCGGATAGAGAGTTGTTCGACGTGAGCGGCTCCCCCGT22.0618556701030926No Hit
ATTCTTGACGAGCGGCGCAGCAAACGACACGTACGGCACGCCGGTCGACA22.0618556701030926No Hit
CTCGAAGGGCGCGCCGGCCAGCTCGGGGCGGTGCTGCGTGGCCGAGGGCG22.0618556701030926No Hit
CATCAGCTGCCTGGCCTATCCCGCGCTTTCGTTCGGACAGTCGGGGCCTT22.0618556701030926No Hit
CTAGTGAGGACCGGCGTTTATTATGCCTGTGTCCCGAGCCAACCCCTAGT11.0309278350515463No Hit
TTCCAGTTGCTCACGGGCACGGGCGCACAGGTCAAGCTGCATCATCTGTG11.0309278350515463No Hit
CTCCAGGGCAGCAGGCACTGAGGACCCAGGGCGCTGGGCAAAGGTCACCT11.0309278350515463No Hit
TTGAAAGTGTTTCTTGACGATGTCCGGCAATGCCCCGAAGGTTACAGTTT11.0309278350515463No Hit
GCTTTCTTGGCGAGGGTCTCCCGCAGCGTGCGCAGCGATGGAATCAGATG11.0309278350515463No Hit
GATCAGGCCACCCGACAGGCTGACCAGCCAACGGCTGCGACTGCGCGATT11.0309278350515463No Hit
GGACCAACCCCCAACGAAGCAGGTAAAAGGGGTGCGTTTAACATCGTGTA11.0309278350515463No Hit
CATGTGTCGAGAGCGGTGCATCTGTCGCTTGGCCGCCTGGGGCTGAAAAT11.0309278350515463No Hit
CTTAAAATCTATCCAAATATCCACCTGCAGATCCTACAAAAGGAGTGTTT11.0309278350515463No Hit
TATTTATTAGTAAGAATTCAATGAGCAGTACAGATGTGATGGGCAGGAAG11.0309278350515463No Hit
GCTCATGGTTCTGCAGGCTTTACAGGAAGCATGGTGCTGGTATCTGCTTG11.0309278350515463No Hit
CTCCGGGTGCATCAATGGCTGAAAAACCTTCTCCTGTTTGTCCCGCTTAC11.0309278350515463No Hit
CTTTAAGGTGTCCTCGGCATAGACCAGTGAGCGCCTTGGCCCTATTTGCT11.0309278350515463No Hit
AGCCACACCGAACACCAATACCAAACTATAGTAAAGGTCACGGGGTCTTT11.0309278350515463No Hit
TATGGGAATAGATACGCGGGTAATGACTCCAACTTATTGATAGTGTTTTA11.0309278350515463No Hit
GTCTTCGCGCATCCAGCGCACCGCCTGTTGGCACGCGGTACGCAGCACCC11.0309278350515463No Hit
GGTCTCCGGCCAGCAGCTTTGAGGGCATGTGTCCAGGAGACGTCATCGGG11.0309278350515463No Hit
CCCAGCACTTTGGGAGGCCGAGGCAGGCGAATCATGAGGTCAGGAGATCA11.0309278350515463No Hit
ACGTGGGCCTATGTGCGCACCGCGCCCGATCGTTTTACGCGCCGCTATGT11.0309278350515463No Hit
CCTGTGGTTTTAATCAGCTATGAGTATGCTGTTTATCCGGCTTTACCAGC11.0309278350515463No Hit
GTCCTGCCCCGACCACGGCAGCAGATAGCCCATTTTGGCCGGCGATTCCA11.0309278350515463No Hit
GCCGTTGTCGCGGCGCTTGAGCAGATCGTCGAGGCGACGGCGATGCATGT11.0309278350515463No Hit
GTTGAGAGTGCTCTCGAGTTGCCAGGTGGTGCGGGCGCTCTGCCGGTCGA11.0309278350515463No Hit
ACGGATAGGTCGATCAAGTAATTCGGGAATGCATGGATACGCTTGGGCTA11.0309278350515463No Hit
GACAAAGGGGGAGCAAGAGTGGCAGGGGAGATGCCACACTTTTTAAACAA11.0309278350515463No Hit
GCCCCGACGTCCTCGACCCCGCCCTGCTGCGGCCCGGCCGGTTCGACCGC11.0309278350515463No Hit
GTTCATGTGGCCAGGCAACGACATGTGGGGTTCCTGGCTGGATCGGATGC11.0309278350515463No Hit
CCTCCAATCCGGCCATCGAGCTGATCAACGTCAGTCGCCGTTTCCTGACA11.0309278350515463No Hit
ACTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACTTGAGGG11.0309278350515463No Hit
GAGAAACTCGGTGCCGGCACCTTGGTATGGAACGGGCTGCACCAGCCAAC11.0309278350515463No Hit
CCACAATTCAAGTTGTGCATCCCTTCCTATTGTAAACCTTTACATTACCC11.0309278350515463No Hit
CCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACA11.0309278350515463No Hit
CCATTTCATTGTAAAACTGGAGAAGATGCAAAGAGAGAAAAGGTAGATCA11.0309278350515463No Hit
GGTGTGGCCGTCGGGCTCGGTCGGGGCGCCACCGAGGAGACGTCGAGACA11.0309278350515463No Hit
AGTATCCATTGTGTTTGGTTCCTATAAACAGTGCCTGAACATCTAGCCTG11.0309278350515463No Hit
TCCTGATCTCGGTGTTGGGCGGCTCCAGCGTGCAGATCGGCGGGCCTGCC11.0309278350515463No Hit
ACGCAACGCGCCCAGGCATGCAGGCGCGTCGGCGCGTGGCGTATCGGCCA11.0309278350515463No Hit
CGCGTGAACGGCTGCGGTCCACGCGATAGAAACGCTCGGTCAGCCGCGGG11.0309278350515463No Hit
GAATACCGCTGGCTCGGCACCGACGACGGCCAAACGCGCGAATACCGCGT11.0309278350515463No Hit
AGAATGCTCCACACATGTGTGATGCTTCGGGGAGTCCCAACCTTCATCAG11.0309278350515463No Hit
GTCTCAATCTCCTTACCTCGTGATCCGCCTGCCTCGGCCTCCCAAGGTGC11.0309278350515463No Hit
GGGCACCCTGAGGCTGCACTGCACATGGGGCCAGGGCTAACTCCTCCCCA11.0309278350515463No Hit
GGCATGAGCCCACCTCTACTTAGTATTCTTTTTCGTTATAGCCAAAGTCA11.0309278350515463No Hit
GTACCCAGTTGTCATTCAGAAGCAGGTTGTTCAGTTTCCATGTAGTTGAG11.0309278350515463No Hit
CCTCAATGCACTCCTAAATATCCCTTCACAGATTGCTAAAAAACTGTGTT11.0309278350515463No Hit
CTGCTTTCTCTTGTCTGCGCCCTGCAAGTACTTGCTCTGGCGTCCATTCG11.0309278350515463No Hit
GCTCACGTTTGATTCGTATGCCGAGCTGCGCGACCTGTTCCATCAGCTCA11.0309278350515463No Hit
GTTGAAGGTCTTGCGGCCAACAGCGAAAAAATCGGGTCGGTACTGGAAGT11.0309278350515463No Hit
GAGGTCAGGAGTTCAAGACCAGCCTGGCTAACATGGTGAAACCCCATCTC11.0309278350515463No Hit
GGGCCGCGCCAAGCGCGCCGTCGCCATTGCGCTGCGCAACCGCTGGCGCC11.0309278350515463No Hit
GCGTTGCCTTGCCCGACCGCAGCGGACCTTGCCTTTGCGCCGTGCCCGAC11.0309278350515463No Hit
TTCATCACCCAGTCCCGTGACAGCACCGGCGCGGCGCAAATCGCCCCTAG11.0309278350515463No Hit
GGCGATCACCTTGACGTTATTGCGCTGGTAGTCGAGGGACATAAACAGCT11.0309278350515463No Hit
GACCATAGGAAGGACTTGGCAGATATGAAAGGCCAGGATGTTGTTCTCTG11.0309278350515463No Hit
GTGATAGACGGCCTGCACGTCGTCGAGGTCTTCGATGACGTCCAGCAGCT11.0309278350515463No Hit
GCAGGGCGCGCCGCCGAGCGAGCCGCCGCCGCACTGGCACGCCTCGAGCC11.0309278350515463No Hit
GCCATAGACGACCAGGTCCCAGTACGTCAGGACTCGTAGAAGGCGTCCAG11.0309278350515463No Hit
GCCACATTCAAAATAGTGGAAAACTTCTAGGTGTTTTTCTTTGTCCCTGT11.0309278350515463No Hit
TCTTGGTTCGATCCCTGCATCGCCGCACACCAGTGCGATTCATTCTGCTG11.0309278350515463No Hit
GCCATGCTGGATGCGATGAACGCCGCGCTCGCCGCCCTGCATCGCATCGA11.0309278350515463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)