FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631486

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631486
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGACTTGATCGTGCGCGGTGTGTGCGCGCTCAAGCCGGGCGTGCCGG44.123711340206185No Hit
TCCCAAGTCAGGAGCGAGTGCCGTGTCGCGCAAATCGGTTAAATCGATCA33.0927835051546393No Hit
CACCAGAAGGTCGTGCTGATCGACGACGAGGCCGCCGCCGTGGGCAGTGC33.0927835051546393No Hit
CGCCGTGGCGGCGCACCTCGGTCTGAAGTGCGTGCTGGTGCAGGAAAACT33.0927835051546393No Hit
ACCCAACCCTAGGCCCATCATTCAACCCAGCTTCAGTTCCCTCATCTATG22.0618556701030926No Hit
ACCCAAGCCGCCGCGCCCATGAACTCGCAAGCCGTCCGGGACTATCTGCT22.0618556701030926No Hit
GGTCCTTGGTGTGGCAGCTTGTGGCGCCGATCCTAAGGTCCTTACCAGTT22.0618556701030926No Hit
CGCCGAAGCCGCGCACCGAAATCTGCACGTCCTGCGCGTAGTTCTGCCGG22.0618556701030926No Hit
GGCATCTTCTTAAACCTCGCCCATGATTGCCATCAAACCCACAAGGAGGT22.0618556701030926No Hit
CGGTCGCGTGCGGCGAGGCTATCGAGATAGGCGGGCACCGACATGTCGTC22.0618556701030926No Hit
CTCTATGCCAATGTGAACGGCACTCAGCAAGGTCACTCTGTGTGCCTTCC22.0618556701030926No Hit
TGCCAGCGGCAACACGCTCGCCATCGACAAGTGGGTCGGGGCAAAGGCAC22.0618556701030926No Hit
ATCACGAAGCCCGCCACACCGCACACCCTCCGCCACTCGTTCGCGACGGC22.0618556701030926No Hit
GCACACCGGGCGCGGATGCGGTCAAGGTCAAGGGCACCATCGGCTGGGTC22.0618556701030926No Hit
GCACCGCGCTGCGCGACGGCCTGCGCCGCGAAGGCGTGGACACATCGATG22.0618556701030926No Hit
GCAAAATGGAGACGAGCGCGATCTTCGCACCGAAGTTCGGCGACACGTAA22.0618556701030926No Hit
AGTAGAGACAGGTTTCACTGTGTTAGCCAGGATGGTCTTGATCTCCTGAC11.0309278350515463No Hit
GCCTCATCGCGCGCAACGCCGCGGAACAGCGGGCCTGCGACGACGTTGTC11.0309278350515463No Hit
GGAAGGCCGCGGGTCAGGCGGCGGCGAGTGCGGAAGCGAAGCGGGCCCGG11.0309278350515463No Hit
GTACATCATGGCGTGATAGGCGAAGTCGGCCAGCGGGTCGCCCAGCGTCG11.0309278350515463No Hit
GCGGTCTTTAGGACCCGGTATTACCAGGATTCGCTCGTGACCGGCCGCAA11.0309278350515463No Hit
ATTATGGACTGGGGCTGTAACTTTTTTTTTTTTTTTTTTTAGAGGGTTAT11.0309278350515463No Hit
GAACGCCGCTTTCGCGTTGGGCTGTCACGGAAAACAGGGACGGTCCGAGT11.0309278350515463No Hit
GCTCTCTCACTTGCCCCTGCTTTTACCATGTGATGTGTCTGCTACCCCTT11.0309278350515463No Hit
GAATTGAACATTCCTTTTCATAGTGCAGGTTTGAAACACTCTTTCTGTAG11.0309278350515463No Hit
GCTGCGCGCCGTGCCCAGACGCAGGTCGGAAGACATCGCCAGGATGGCGC11.0309278350515463No Hit
GAATTTGGCCTCAGCGCATCTCAACGCGGCCGACAGGCACCTAGTGGGCC11.0309278350515463No Hit
GTTTTGTCGCTGAACAGATCGAGGCCGGCAGCGGCATCATCGCTCTTGAG11.0309278350515463No Hit
TCCTCAATGTCTTGCAGCCAGCCCGGTGCAATAAACAGGAAGACTTCGGG11.0309278350515463No Hit
GGCTGGAGTGCAATGACAAGATCTTGGCTCACTGCAACCTCCACCTCCCC11.0309278350515463No Hit
ATCAAGTCGACCTTCACGCCCGCCCGCGACGCCTTGTACAGCTCGTCGAT11.0309278350515463No Hit
GACCGCTGGTCCTTGAGCTGTACATCGCCAATACCCCCCGGCTTTCTTAC11.0309278350515463No Hit
TCTGGAAGGCGCGTGCGATGTATTCTGGGATGCGTTCGACGCTATCGATC11.0309278350515463No Hit
CCTCTCAATTTCTCAGGGAATCCCCCACTCTGATAATTGAATAAAGACCC11.0309278350515463No Hit
AGATCTACCAAGCAAATGGAAAACAACAACCACAAAAAAGCAGGGGTTGC11.0309278350515463No Hit
AAATTGTTGAGCATATTAATAATGCCAATAGCATTTCCATTTGGCAGAAA11.0309278350515463No Hit
GGGCACAATGGGACCCATGGGTCGTCATCATGGTTCGCGCAAATGGCAGC11.0309278350515463No Hit
GCTCTCACAGTGCACGGCCAGCTGTGGGGGAGGCGTTCAGACGAGGTCCG11.0309278350515463No Hit
CTCCGGACTGGTGGCCGCGCTCGACGAGCTTCTGGGGCAGCGTACACCGG11.0309278350515463No Hit
TCTGGGTACCACGCCAAATGGGACTGGCGGCACTGCGCTTGATTTCGCCG11.0309278350515463No Hit
TATTTGTCCCCACTGAAATCTCTTGTTGAAATGTACTCCCCAGTGCTGGA11.0309278350515463No Hit
GTTAAAACTTCGTTTTGACTTAGCAGCTGGAAACACTGTTTTTGCAGAAT11.0309278350515463No Hit
GTTAGCTTCGGCGAAGCGGAGAATTTAAGCCCCAGTAAACGGCGGTGGTA11.0309278350515463No Hit
GTGTAACAAAAGTTAAATGTGGCAGTGAATGCACAGAGAAATTCTTAGAG11.0309278350515463No Hit
CCCGGACAAGCGGGTGCTCCAATCTCACTCATCGCACTCGGGCGGATCCT11.0309278350515463No Hit
GACCAACATGAACATGAACGAGGTGCTCGCCAATCGCGCCAGCGAGCTGC11.0309278350515463No Hit
GTCGATCGCCTCGTCGAGCGAGGCGTCGTCGATGATCTTGGCGCCGTTGC11.0309278350515463No Hit
ACCCAGGCGAGACCGTCCTGCAATTCAAGGCAGGATCTTCCGCGCCCACG11.0309278350515463No Hit
TTCCTGAGCTCATCTGGGCTGCAGGGCTGGCGGGACAGCAGCGTGGACTC11.0309278350515463No Hit
GACCAGGGCGATGACGGTGGAGGGCAGCAGGGCCAGCCAGCGGCGGATGC11.0309278350515463No Hit
CTGAGACAAGAGGCTAAATTCTCTGCATTTCCGTGTTTCCATTTGTGTAA11.0309278350515463No Hit
CTCATATATTATCTTATTGTTGCTTATCTCACACACACACAAACACACAC11.0309278350515463No Hit
CGGCAAGAATGCGGCCGCCAGCTTTACGTCGGAGATGGACCAGCAGGCGC11.0309278350515463No Hit
GTCCAAGCCCCAACCCCATTCCTCTGGCTCCACAGGGGTAGGGCTGAGGC11.0309278350515463No Hit
CCACCGCTTGCAGGGTCACCCCGGCCGCTCCCAGGATCGCTCCTACCCCC11.0309278350515463No Hit
CATTCTTGCCAAGCCGCCGGCCCGACGATTGGCAGCAGACCTCGGCGTCG11.0309278350515463No Hit
GTTCAACACTGCCCTGGGCCTGTTGATGGCTATTGCTCATCGAACTCACC11.0309278350515463No Hit
TCATGGTCGAGCGCGATAGTCAGAAAGGGATTATCATCGGTAAAGGTGGT11.0309278350515463No Hit
AAATATAGGTTGCGGATGCAGCGAATGAAAAACTGGCAAAAGCCAGCAAT11.0309278350515463No Hit
CAATCACATCGCGCGATAACGGCTTTGTCAAAGAGCTACGCCGCCTGGCG11.0309278350515463No Hit
ATGGTGTCGACATCGCGGCCGACATAGCCGACTTCGGTGAACTTGGTGGC11.0309278350515463No Hit
GCTTCAAGCTCTTTAAACACAGAGGCAAATCATGCATCGGCCTGGGAGAA11.0309278350515463No Hit
CATAATCTCTTGCCTTCTGGCACCCAGGGAGTAGCAGATCCCATGAAGCT11.0309278350515463No Hit
GTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCT11.0309278350515463No Hit
CCTAACATGCATGTCAGCCACGCTCTCACTCACTCATCCTTGTTTTGATT11.0309278350515463No Hit
TCCCACGCTCACGCAGCAACCGCTGAAGTTTGTTGGCGACCTGCACTGAC11.0309278350515463No Hit
GTGTCAAACCCTGCTCCTCTTGGACAGCACAGGTGTACATGTGTCAAACT11.0309278350515463No Hit
ACGGAAGCGGATGCAAGCGAATCCGAACCGTCTCTGGAATTTTTTTGTTT11.0309278350515463No Hit
GACGTCGTCACCGGCGACGACGGCGCCATCGAGGTGCTGACCGCACCTAG11.0309278350515463No Hit
ATGATGGTGAGGGTGATGTCCCCCTTGACAGTACGTGGGGCGATCATGAC11.0309278350515463No Hit
GTCGTTCAGGTGCGACAGGACACGGGCATACGCTGCTTCACCCATCAGGT11.0309278350515463No Hit
TCATGCTGCAGATCCAGCACTAAATCGAAGCTCTTTAGGAGCCCATGCAA11.0309278350515463No Hit
GCCTGAGTGTGCACGTCAAGCGCGACTTGCCAGTGGTCGTTGATGAACAG11.0309278350515463No Hit
GACGCTGCCCAGGTTGGGGCGCGTGACAAACGTGCCGGGGCAGGGCGTGT11.0309278350515463No Hit
GTTTTCGGCCCTTCACCATGAGCCACTACCGGCAGGCCGTCCACACGCTG11.0309278350515463No Hit
CAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCG11.0309278350515463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)