FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003631667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACGAGCTCCGTGTCCTGGGTCTGGTCCTCCCCATCCCGCTGCCAGGTC29.523809523809524No Hit
GTTGTGGAATTCACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAA14.761904761904762No Hit
TCCCTGTACGCCTCTGGCCGTACCACTGGCATCGTGATGGACTCCGGTGA14.761904761904762No Hit
GCCTTCAATCTCAGGTTGGCAGCACAAAGCTGCTGAGAGTCCCAGTGTCA14.761904761904762No Hit
TCCCAGTACTGTGCTCCCATTTCCCAATGCTATGCTCCATTTCCCAGTGC14.761904761904762No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA14.761904761904762No Hit
CCTTCAGGGGGTCAGCATTCTGGAGCAGGTGCATCACATGGTCCTCTGTC14.761904761904762No Hit
GTTCTGGGTCGCACTGGAGCGCAGGCGTTCCCACTGCACCCTGGAGAACG14.761904761904762No Hit
ATTCTGGATCTCATAGTAGAACACGGAGAAGTTGAGGGCCAGGCCCAGCC14.761904761904762No Hit
ACGCAGAGTAGTGTTTTTTTTTTTTTTTTAAAAAAAACCCCCAAAAAAAT14.761904761904762No Hit
ACGAAGAGTAGTGTTTTTTTTTTTTTTAATAAAAAAACAAACAAAAAAAT14.761904761904762No Hit
TTACAAGTCCGCTCCTCGGGGAGCTTGATTGATAATTCTGTATAAGGTGA14.761904761904762No Hit
GTTGCAGGTGGCGGCCTGGGCCTCCACATCCTGGAAGCCCTTCTGGGCCT14.761904761904762No Hit
GTGTAGTTAGCAGCCCCACAGCACTTAAAATCTGCCTGCATCCTGTCCAG14.761904761904762No Hit
GTGTAGGATAGACCATAGAGAGTTCACTGGCTAAGTCCATAGTTCAAGAG14.761904761904762No Hit
CACCACAATACCAAATTCACCCAAGAAGAGGTTTCAGCATTGTGTAGGTT14.761904761904762No Hit
ATGGTGAGCAGAGGCATGACAGGAAACATAGGAGGACAGTTTGGCACTGG14.761904761904762No Hit
GTGGAGAACTCTTGGCCAAAGGTTTTTGGGGGGAGGAGGAGGAAACCAGC14.761904761904762No Hit
TCTCAGGGCTGTATCTCGAGAATCAAACACATTTCCTAGAGTCCTGCAGT14.761904761904762No Hit
GCCTGCAGGACACCTTGGGCCAGCTTGGTTTTACTCTAGATTTCACTGTC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)