FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003631668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCAGAGGATGGAGCCGCGGGCGCCGTGGATAGAGCAGGAGGGTCCGGA29.523809523809524No Hit
ATTTAGGCCACAGAATGGAGGACTTGATTTTGAGAGGAATGGGAAGTCAC29.523809523809524No Hit
GCACAGTACTGGGAAATGGGAGCTCACAGCACTGGGAAATGGGAGCACAG14.761904761904762No Hit
GTGACCTGTAAGATGGCTGCCTACTCTAAAAAAACTTACAGATTAGTTGA14.761904761904762No Hit
TCTCCTTCCAGCCTGCGGGCTCGACCCCACCGGTGGCCTGGAGTACCGCG14.761904761904762No Hit
GTCCACCACCGCCTACTTCCTGTACCAGCAGCAGGGCCGGCTGGACAAAC14.761904761904762No Hit
CTATTGCAGAGTGCCCATGGAAGACGGGGATAAGCGCTGTAAGCTTCTGC14.761904761904762No Hit
GTGTGGAGACGAATTGCCAGAATTATTAACTGCGCAGTTAGGGCAGCGTC14.761904761904762No Hit
GTGGATGAGAGCTGGTTGCAGTAGAGGCCTGTGTGTCTCAGTGCGGGATC14.761904761904762No Hit
ACATTATACTCCTCCTATAAAGCCAACTTTGATTAAAAACCACTAGTTTC14.761904761904762No Hit
GGCAGTACCAGGCCAAAGTGGAATGGCAGGTGGAGAAGCACAAGCAAGAG14.761904761904762No Hit
ACTTTGTAAGATGCAAAGAGGTTGGATCAAGTTTAAATGACTGTGCTGCC14.761904761904762No Hit
GTGTACATGTGCTTTAACTAAATGAACTCCAGAGGCCAACAGCAGCAGAC14.761904761904762No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCACAGCTAGGAATAATGGAA14.761904761904762No Hit
GGCCAAGGCCACGGTGTTTGTGAGTCTGACCCACGTTCAGCCGGTCCCCT14.761904761904762No Hit
CCTTCTGCATCCTGTCGGCAATGCCAGGGTACATGGTGGTGCCGCCAGAC14.761904761904762No Hit
GTGCTATAGGGCTGCGCATTGCACTGGCCATCTCAGCTATAGCCGTCTTC14.761904761904762No Hit
GATTGCCGTGGGTGTCGGGGCACAGCTTGTCCTGAGTCAGACCATAATCC14.761904761904762No Hit
CTTACCGGGAGAAGATTGAGAAGGAGCTGGAGACAGTTTGCAATGATGTC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)