FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003631799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGTGCCCATCTCGGAAGACGAGGTCATGAAGATCGTCAACCAGATGC211.11111111111111No Hit
GGCGCCGTCCGTGTCACCGAGCTGCAGCGCGCCGGCAAGGGCCCGATGAA211.11111111111111No Hit
CTGGAGGGCCGCGATGGTGCGCCCGTCCGTGCGTCCATCGCGGCAGAACC15.555555555555555No Hit
GTTCATGGTCGCATCCGGTGTTTTCGCCGACCTGTTTGGCCGCAATGCCG15.555555555555555No Hit
GGGCTGCGCGGGGTAGTAGCGCGGCTTCTTGCGGGTCCGGTTGAGCGAAT15.555555555555555No Hit
ACCTAGGGAAACATATGGGGAAAATCGGGCTCATTGTTTTGCAAGAGCTT15.555555555555555No Hit
CTACCTGAAATCTTAGTGTCAACCTGGGGCCTATGTGTCCACTTGGAGTC15.555555555555555No Hit
CGACCGGGCTTCTGATGAACGGCGATCGGCCTGAGGGCGGGCGCTGGAAC15.555555555555555No Hit
GTGCGGGGCCGGGCACTGGCACCGGCGGTAAAGCAAGCGTGACCGCCGCG15.555555555555555No Hit
AGAACAACGGAGAACCATTCGTAACTTCGATACAGGGAATGGCGATACCT15.555555555555555No Hit
GCCGTGATACGAGCAATCACGGTTTGACCATAATGGTTATCCGCAATAGC15.555555555555555No Hit
CGCCCGCTGCTGACCGAGATCGACGCGGTCTCCAATCGCACGCGCATCAG15.555555555555555No Hit
AGCGTGAACAGATTGGTCGGATCGGGCGCCGAGAGGTCCTTGATCCAGCC15.555555555555555No Hit
GTACAGCTGCTGCAGATGCGGCACGCGAGCCAGGTGCCGGGCCTGCGGAC15.555555555555555No Hit
GCTCTTGCGCAAAGCGGCTGCCGCGCCGGCGCGCAGCAGCTGCTCGACGT15.555555555555555No Hit
GTGCGGACCAGCGTGCCGTCGGACAGGCGCATGTCGGCCGGGGCGGGCGG15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)