FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003631935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003631935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCATATTCCTGAAGGCAGCCCGTACCACGGCAAGTACAAATCCTATGCC34.615384615384616No Hit
CGTTCAGGCGTCCTTATGCATCTTTATGCTGGGCATGGAATTCGTCATAG34.615384615384616No Hit
GTCCTGCACCAGCGGCCGGTTCTCCTTGATGAGTTCCTCGCGCACGGTCA23.076923076923077No Hit
GTGGTGGGCGACACGGTAATGGTGGGAGCCGAGGTGGTCAGCGTGTAGGT23.076923076923077No Hit
GCAATGGCTTGTACCAGCGCAGAATCGCCGCAATAAAGGCCGGCGAATGC23.076923076923077No Hit
GGGGCGGAAGCGCCGCACCGCCGACTCCACCACGGCATTCCAGGGCTCGG23.076923076923077No Hit
AGGTTGAACGAGTAGCCCGTCGGGATGACAAGGCCGACCACCGAGCGTTT23.076923076923077No Hit
TCGTGAAGCTGATGTCGTCCACCGCGGTGAGGCCGCCGAACTGCTTGCGG23.076923076923077No Hit
CTTCCACCCATGCCGACTTCGCCCGCATTCTGAATAGCCATCGTGACTTG23.076923076923077No Hit
GTCGCGCTTCGATCACCATTCCGGACACGGGAGAGGTGGTGATGGCCGAT23.076923076923077No Hit
GAAGAGGGGCGGGGCGGCGAGGCGGCCCGGCGCGATGCCGAGCTTGGCCA11.5384615384615385No Hit
GGCCCAGCCCCAGCAGCCCGATCAGCACGAAGCTGAGGAACTCGATGCGG11.5384615384615385No Hit
GTTGGCGGCTTTGCCGTGGCGACGGCGCTGCTGCATACCGCCGGCATCGG11.5384615384615385No Hit
GTTTCGAAAACTTCGAGAAATGGGAGGGCACCCAGAACTTCACGGTGCGC11.5384615384615385No Hit
GAGGTCAGTGGCCACGAGGCGCGGATCGACGGCCATGTCATCGGCCTGCA11.5384615384615385No Hit
GCCCGCCACCAGGCCCAGCCAGGGCGACAGGCCGAGCACCGTCGTGAGGT11.5384615384615385No Hit
GTATTCCGGGTTGCCCTTACCGTTACCCATACGGACTTCGGCAGGCTTCG11.5384615384615385No Hit
GGATGGAAAAGCCGATCACCTTGCCCAGCAGGCCCAGCTTGATCTGTATG11.5384615384615385No Hit
TGCCAGGCGATATACCGGCCGCCGCGCCCAGGTCAGCCACCGAAAGATCG11.5384615384615385No Hit
GCCGTGAAGGGGACACCCGGTAAGCGCCGAAAAGCGTGCGCTATCCACCC11.5384615384615385No Hit
CAGACAAGCTCTTCATCGACATGAGCTCGATCTCGCCGATTGAAACGCAG11.5384615384615385No Hit
GTGCTCACGACCTTCCTGCTGGGGGAAGGCATCACGATCATCACACCCAC11.5384615384615385No Hit
GCGCACGATGGGCGCCAGCACGGTGGGCAACGCCTGCATCTGGGCCAGGG11.5384615384615385No Hit
GTATTCCGGGTTGCCCTTACCGTTACCCATACGGACTTCGGCAGGCTTCT11.5384615384615385No Hit
AACTTGGTCGACTCTTCGGCGCGCTGCTCCAGCAGCGAACCCAGCGGCCC11.5384615384615385No Hit
GGGAAGGCCCTCGGGACGATCGAGGTCCTGCCTATCCGTCCAGCTCGGAC11.5384615384615385No Hit
TTCCCCATCTTTGTGGTTTTATCTACTTTTTCGTGTTTTTTGTTGGTGGT11.5384615384615385No Hit
CCAGCCCGCGCGCCAGGCTGCGCAGCGTGGGCACCGCCAGCCCCAGGCGG11.5384615384615385No Hit
CGGATGGGCAGGCCGGTGCCGGACGGCATGTAGAGCATGTCGCCCATGCC11.5384615384615385No Hit
GACTAGAGAGATATCAATGTGCCAGGTGCAAGCAAAGAGGGCATTGGAAA11.5384615384615385No Hit
CCAATTCCTTCAAAAGCTGGTTCAAAAGAGGCATTTCACTGTCAAACGAC11.5384615384615385No Hit
GAACAGGCCGATGCCGGTCTCGGGCATCGCGAGCTTGGAGCGCTCGCTCA11.5384615384615385No Hit
GAAACGCCACACGCGGATCTAATTCATCGAGATGCAACGGATCCCAATAG11.5384615384615385No Hit
GTTCTTCGGCCGCCACCGCAGCGAACTGCTGTGGATGGCCTTTGTGGCGC11.5384615384615385No Hit
CCCATGATCCAAGTACTCTTGACACTTCCGTCCCAGCCCAGTATGCACAG11.5384615384615385No Hit
TGGTGGTTCTGTTGCCGTGACCTCCAGCGAGCTTGTCACAAGATTTGACT11.5384615384615385No Hit
CTCACGACCTGGCAGTACAAGGCCGGCCTGCGCGACTACCTGGCCCAGGC11.5384615384615385No Hit
TCCCCATGTTCACCCCGATTTCATTGACGATTTCCTCCGCGAGCGCCCGG11.5384615384615385No Hit
TCTTCATGCCGAAGAACGCCTTGCCGAAGTCATCGATGGAGCGCTTGTTG11.5384615384615385No Hit
GCGCTGGGCAATACGGCCGTGCTCAAGATGTCGGAGTTGTCGCCGCTGAC11.5384615384615385No Hit
CGGATGAGGTTGTGCAGCCTTTCCTCAGCCTTCTCCTTATGTAGAGCGTG11.5384615384615385No Hit
ATCCCCCGGTGCACCGCGGCCAGCTGGCCGAGGATCTCCGGGGTGGCGTC11.5384615384615385No Hit
GCCCTATGCGGCGCCTTGAATTTTTGTTGCAAGGAGGAAAAAAGAAGGGG11.5384615384615385No Hit
ATAGGAACGCATTCACACCCCTTCCAAACCCGAATCAATTCGACCAGACC11.5384615384615385No Hit
CTGTTGCCAGGCTGGAGAGCAGTGGCGCAATCACGGCTCACTGCAACCTC11.5384615384615385No Hit
GATAGGAACGCACCTTTTTCGCGGATGCGGGCGACCAGTTTTTCCGCTTC11.5384615384615385No Hit
CGTTCGGCCTGTCGCCGGCGCGCGAGAAATTGAACGAGACGCGCGCGATC11.5384615384615385No Hit
CCGTTTGCCGGACATCAACATTGCCGCCCGGCCAACGATGTCATTCCGCA11.5384615384615385No Hit
GGCGCCGGCGCAGCGCGGCCAGCAGCGTCGTGCCCTGCGGATAGTCGGCA11.5384615384615385No Hit
CCGCCATGCCAAACACCTGCTGCAACAGGCAGCCAATCTCAGCGGGAATA11.5384615384615385No Hit
ATCACATCGTGGTCCAGCGATTGCAGCTCGTCGGGCGTGAGCATGCGATC11.5384615384615385No Hit
TCATTTCGCTCTCTTTCCTCGGCTACCCGACCGGGTCCCTGATTTCGACG11.5384615384615385No Hit
CTGCACCTGCCGGTGCCCGGTCCGGTGATCGGCATGGTGTTGCTGGTCAT11.5384615384615385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)