FastQCFastQC Report
Tue 10 May 2022
EGAF00003632521

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003632521
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2199531
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTACACCGCCCAGATCGGAGCGGACATCGCCCTGCTGGAGCTGGAGG46120.20968106382678853No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25170.11443348604770745No Hit
GTGTAGAACTGTGGGTGCACGATGATCCTGCTGACCGGCAGCAGCTGGTC22020.10011225120264275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)