FastQCFastQC Report
Tue 10 May 2022
EGAF00003632590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003632590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1616823
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTATACCAGCGTTATGAGATCAAGATGACCAAGATGTATAAAGGGTTC26580.1643964738255208No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22880.14151208883099758No Hit
GGGTGGACACTGTGCAGGCTTCAGCTTCCACTCCGGGCAGGATTCAGGCT21460.1327294329682346No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG20320.1256785684023545No Hit
GTATAAAGGGTTCCAAGCCTTAGGGGATGCCGCTGACATCCGGTTCGTCT19180.11862770383647438No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17010.10520632128563237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)