FastQCFastQC Report
Tue 10 May 2022
EGAF00003633389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003633389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14645
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGATGTGCTCGGAAGCTTCCGGGTGGAACGTGATCAGGTCGGCGCCGG310.21167634004779787No Hit
CCCCTCTGTGGGCACCAGCTTGGGGAGGTAGGTGACTTTTCCTTGCAAAT300.20484807101399793No Hit
CAACCGGACGGCCCACACGTCAACGGATCACTGACAATAGGCGAGAACAT300.20484807101399793No Hit
AGGTAGTACAGGAGTAGCTCTATCAAATGCTTCACTGGATATTGCATTCC260.17753499487879823No Hit
TGATTAATCAACCCATTTATCAAGTTTTGATGCTGGTGACGCCAGAAGAA260.17753499487879823No Hit
GTGCCACGCAGGGCGGCAGCCTCCGGGGAGACCTCCTGGGCGGCCGAGCG240.16387845681119836No Hit
GGCTGATAGTGCCGTCAGGAGTCAGGAGGGTTCCGTCAAGGTCAGTTGCG240.16387845681119836No Hit
GAATACGGCCTGAGCCTGCTGCAACTGGGCGCGCCGTTGATCGTGATCTT240.16387845681119836No Hit
GTTCAGGTGATTCTCCCGCCTCAGTCTTCCGAGTAGCTGGGATTACAGGC230.15705018777739843No Hit
GGCCGGAACTGTACGGGCGGCTGGTCCAGGATATCTGACCCGGTTTCACC230.15705018777739843No Hit
GCAAGCGCGCGGTCGGGGTGCATTACCTGGTGGGCAACAGCAGCGAAGGC220.1502219187435985No Hit
ACGTCCAGCACCGTGCTGGCGGTGCTGCCAGGCAGCCGGCATGGCGAAAT210.14339364970979857No Hit
GTATTTGGGTTTGTATTTGGTTTAGCATTAGTGTTTCAAGATACCTTTTT210.14339364970979857No Hit
GTTCGGGGTCGTCACCATGCTCATCGGAGTCGACGACATATCCAGCATCA210.14339364970979857No Hit
AGCGCAGACCACGCGATGGAGGCGGACTACCTGAGCGTGTTGAACCGCTC210.14339364970979857No Hit
CGTCGGCAATGCCGCGACGGACCTTCTGCAGCAACTCGAGCTGCTTCTGG200.13656538067599863No Hit
CACCTGGAGTGCGGATCTTGTCCCTCTGGACATGAATATCCGCGGCTTTG190.1297371116421987No Hit
TCATTGCCGTGTTCGCGGCCGACCTGGCCGGCGGGACGCAAAAGGTGCTG190.1297371116421987No Hit
AGCCGGGCCGGGCCGAAGCGGTGCAGGTGGAAACGCCGGCGCGCGAAACG190.1297371116421987No Hit
GCACTGCCGCGGCAGCTCTGGCAATGAATTAAAACATAGATAGAAAGTGT190.1297371116421987No Hit
GGTATAAACAGTCAGCTAGAAACTTAGCGAATTGGCACTATGATGACAAG190.1297371116421987No Hit
CCGCCACTTCGCCCGCAACGTCGGCCGTCTCGTCGAGGTCTCGGTCGACG190.1297371116421987No Hit
GTTCCTCTATATATCCAGGCCGTGAGGCCATTCGCTAATTTGGGTTAGAT190.1297371116421987No Hit
TCAAAACGGTCATCCAGCGCGCCAATGAAAACAAGCACACCGGCACAAGC190.1297371116421987No Hit
GATGACCACGGTATCGTTCTACCTGATCACCGCCTACACGCCGACCTTCG190.1297371116421987No Hit
GCGCATAGCCTTCGGTCGTGTGCGGACGCGTGAAACCGTCGGGATAGCTG180.12290884260839877No Hit
GCAGACCGATGATTGCGCCGACCAGAGCCATGGCCCACGGGATGGCCCGG180.12290884260839877No Hit
GTACGTCAACCTCGCCGGTGGCTGAGCCAGGTAGCAGAGGGAGTTGATTG180.12290884260839877No Hit
CTACGCCATTGGCGACTGTACCGCCAAGCTCATGCTGGCCCATACCGCCG180.12290884260839877No Hit
GGCCGAGCGTGTTGTCGAGCGACGTCTCGAACGTGCGCAGGTTGCGGTTG180.12290884260839877No Hit
AGTAGCATTTGAAATCGAGCAACCCGCCATCGAACAATCTGAACAGTTTA180.12290884260839877No Hit
CTCCGGAGAAGTCGCCCTCCTCAAGGCGAGCCTTGATGCTCGAGAGGAAA170.11608057357459885No Hit
TACTCGTAGATATCGAGCATCCGCATGTGAATCTGCACGAGGCGGCCGTC170.11608057357459885No Hit
GCCCTCGTTGCCCCGACCTGGGCCGAGTTGAGGGCAGCACCGCCTGGACG170.11608057357459885No Hit
AGCTGGGCGGCACGAATGGCGGCAACATAGCCACCGGGGCCGGCTCCAAG170.11608057357459885No Hit
GTGCTCCAGACGCGCGTGATGGGCATCTGCCCATGCCTGGGAGAACCCTG170.11608057357459885No Hit
ACCTCGCTGCGAAGCAAGGCGAAATGATCAGAGGTGTTATGACAGATATT170.11608057357459885No Hit
CCGGACCACCGTGCAGCCGGCGCAGTGCAAGGCGCCGCTGACCGCCCTGG170.11608057357459885No Hit
TCTGTGAAGAGGGTAAAAGACAGGGAACACTTGAGACATGATACTCAGAA170.11608057357459885No Hit
GAATGCAATCATCATCGAATAGAATCGAATGGAATCATCGAATGGACTCG160.1092523045407989No Hit
AGGGGAGCGCCAAGTCCCCGGCGTACATCGGATCCGAGTAGACCGAGCGG160.1092523045407989No Hit
GTAGATAATAGGCAATTCTACCAGCTCCAACAATAAGAAGACTCTTCACG160.1092523045407989No Hit
GCCGATGACGCTGCAAGCCCTCGCCCATCTCAATATCGCCACGCTGGTGG160.1092523045407989No Hit
GTCTTGCTCTGTCACCCAGGCTGGAGTGTGGTGGCACAATCTCGGCTCAA160.1092523045407989No Hit
GGCCAGGCGTGGCCGGAACTTGAGGAGATCGGGGTGGAGGCCGTCACCCT160.1092523045407989No Hit
CCGGATCACCCCGTCGAGGAGCTGGAGCAGGTCGCCGAGCGCCTGGACCG160.1092523045407989No Hit
CGCTGGATACAGACCCAGGCTCCAGCCCCAGTCATACCCTGTAGGAATGC160.1092523045407989No Hit
GGTGCCGAGGGCGGCGAGATCGAGATTGCACTGGACGCCGGCGCCATCCT160.1092523045407989No Hit
CCCTGCGCCGCGAAAAAATTGATGAGGATGCGCTCGCCGCCGCCGCATCC160.1092523045407989No Hit
ATGTCGGACTCCCAGCAGACCGCGACCGCCGCGGCCCTGCACGAGCTCGG160.1092523045407989No Hit
AGGTAGTCGTCAGCAGACTTGTACGAGATGTAGCCGTCGTAGACCTTCAC160.1092523045407989No Hit
CGATCATCTCCGCACCGCCCGTGCCCAATTGGCCAGCATCCGTTTGCACG160.1092523045407989No Hit
GCCCAGGACGATCAGGTCGTCGTTGGATATGGCATCGGCAATTGCCAGCT160.1092523045407989No Hit
GATGGCGTGGTGACCGAATACGAAATCCATCCGGAAGACTTCGGGCTGCA150.10242403550699897No Hit
CTCAAGCAGAACCCGAGGTTCAACGCCAACATCGACACCGAGGCCGGGAC150.10242403550699897No Hit
GTCCTGCACCCACGAGTGATCCGGTGGGGGTTGGAGGGACGACGTCGCCC150.10242403550699897No Hit
GTTGTACGTGACGCAGGCTTTGACCCACCATCGATCTGTGCGTTCAGTGG150.10242403550699897No Hit
CCTCAATCATGTTCAGGAAATGATCAGGTCAAGATGTGGAGTGAGCCAGC150.10242403550699897No Hit
GAGTTGCACCGCGGCAGTTCTGCCGCGACTACCCGTAGCCCCGGCTGACC150.10242403550699897No Hit
CAAATACTGTCTAATTTTATTCATATGTGGTACTTAGAGTAGTCAAATCC150.10242403550699897No Hit
TTCTGTTTGTTTGCAGGCTTCAGTTCCTTGTGGGCTTTTTAACTCAATAG150.10242403550699897No Hit
TTTGTGGAGATCTGTAGCCAATTCATGATCTTTGGAAGTTGGGTGTTCTC150.10242403550699897No Hit
CTTTTTATTCTTTGGCAAAATCGTCGTAAAAAAGCGACTCGCGTTGAGCA150.10242403550699897No Hit
CATCTATTCAGATAATCATATATTAATAGCTTTTCTATTCTCTCTCTCTC150.10242403550699897No Hit
GCAGTGCCACGAGCTGATCATCGGTCAGCTCGTGGACGCGCAGGTCACCG150.10242403550699897No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)