FastQCFastQC Report
Tue 10 May 2022
EGAF00003633390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003633390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14645
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGTGACCTGAGCAAAAGAAATGCCCCCGAGTTGGTGGGACTCGGGGGC310.21167634004779787No Hit
TATAAATGCTTCTCCCAAATCAAGATTTTCTCTTCAATCTGTGCCTTTGA290.19801980198019803No Hit
TGTCCGCAGCCATCGATCCGTCCGGTTTCCGCATCGCCCCGTCCATCCTG270.18436326391259816No Hit
GCTACTGCCATTTCCCATAGCAACCGACATACCAACACCCGCTAACATTT270.18436326391259816No Hit
GGTGTAGGTGATTCTACTGCCCACTCTAGTGATGTAGCTGGATTAGCTTC260.17753499487879823No Hit
CTGGTGCGCAAGCTGGCACGTGAGAACAACGTCGACCTGTCCACCATCAC240.16387845681119836No Hit
GTATATGGCTGGGCATGGTGGCTCATGCCTATAATCCTAACACTTTGGAA230.15705018777739843No Hit
GAACAGATCGCGCTGCTCGGCACCCCTAATCAGGTCGAGGCGGTCCGCGC230.15705018777739843No Hit
CTCCAGGGCCTTGTCGCCCATCACGCCTACCGCGGCCAGCACGATGAACA230.15705018777739843No Hit
CGGCGAGGATCGTGCCAATGTCGTCGCTCTGGGAGACGGGGCCAATGACG220.1502219187435985No Hit
GTGCATGCATATTGCATGTACACCTCCAGGTGGTCCTGCAGGTTCTGCCC220.1502219187435985No Hit
GTGTGGGGCACAGTGTGTGGAGCCCAGGGCACGTCGTGCCACAATTGCCC210.14339364970979857No Hit
TTGAAACACCTAACAACTTTGCCAAGTTAAATTTCATACCAATTTTAGAA210.14339364970979857No Hit
GGCCAGGCCGATCAAACCGACTGCCACCCAGAGATTGTCGGCACTCGCGG210.14339364970979857No Hit
ATTCTGCACTCCCATCTCGACCGTGGCGGCATAGAAGGCTGACAGTGCCT210.14339364970979857No Hit
CAGCATCGCGGTGCGCGCCTGGCCATCGAGCAGGTGCGAGCGCATCACTG210.14339364970979857No Hit
AGCCCACCCTCGATAAGTGTAGCGGAATCCCAGTGCGGCCCGTTGCTCAG210.14339364970979857No Hit
ATCTTGCGTTGAGCGAAAATCTGTCTACCTTCGGGAGATAAAAGCGCCTG190.1297371116421987No Hit
CGCCAGGCATGGCCTTGTTGCCCGTCTCGTGGATCAGCCATGTGGCAATC190.1297371116421987No Hit
ATTCCATGCTGCTTGCGTGCGTCGCGGATAAGACGACCGACCGAAGCTGG190.1297371116421987No Hit
ACCGACATCTATCGCGGGCAGATCGTCGATGTGAGCGCCAGCGTTTATAC190.1297371116421987No Hit
ACTCCGACCTCATCATCCCCGACATCTCCTCCACGATCGACGAGATCACC190.1297371116421987No Hit
GTCTTAAGCCTTCCAGAGAAAGTTTCAGGACATCTCCGCATCTTCACCGT190.1297371116421987No Hit
CGTCATGGCCGACTAGCGAGGCACCGAGAAGCTCGCCGTGACGGGCGTCG190.1297371116421987No Hit
GGATGGACAGGCGCTCCAGCAACGCGTCCGGCTTCACGTCGGTCAAACCG190.1297371116421987No Hit
GTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCA180.12290884260839877No Hit
GTCTGGATGTGCCGCTCGACGTCCTGGCGGCCCTGGCCCGTGAGCCGGGC180.12290884260839877No Hit
CTTTCACTACCGAAGAAGAGTCTTTGCACAAAGGCTAACTTATCATTCAA180.12290884260839877No Hit
CTGCTCATCACCCGATTCAAGTTGCACCCCTTCCTCTCCCTCACGATCGG180.12290884260839877No Hit
AGCCAATACCGCTACCGCGGCATCATGCAGACCAACAACAAGCCGGCCAT180.12290884260839877No Hit
CCTTGTTCGTCACCCACGATCAGGAGGAAGCCTTGGCCATCGCCGATCGG180.12290884260839877No Hit
GATCTGTACCAGGTGTACGAAGCGCGCTCGTGGGGCGCGGACTGCATCCT180.12290884260839877No Hit
CCTGTCCACCCACGCCCCCGGGGATCTTGTTAAAATGCACATTCTGATTC170.11608057357459885No Hit
CCGAAGACAATCGCCAGGGGCCAATGAATATGTCCGGCCACGGCGTGCGT170.11608057357459885No Hit
TCTCAAGCCCAACGCGTCATTTCGCAAGGACGAGATCACCCGGGTCAAGG170.11608057357459885No Hit
ATTAGATTCCATTCGATGATGATTCCATTCGATTCCATTTGATGATGACT170.11608057357459885No Hit
CGGTGTATGTTGGTAGATTTTACCACAGTTGAAACGACTTCGGCTTTTCA170.11608057357459885No Hit
GGGCTCCACTCTACCTGCACGATCGCCGGACCGAGGCGGTCGAGGGCGAC170.11608057357459885No Hit
GTCTGCAGCACATGAACCAGCCGGCCTACGAGTTCTACCTCAACCGCAAT170.11608057357459885No Hit
GTACGAACTGGCCGTGTACGTGGAGTGCAAAGCCGGCTTCTACGACGCCT170.11608057357459885No Hit
CGGCCGCATGATCTTCCGAGGCCATCTGTTTGTGGGCGATGTGCTGCTCA160.1092523045407989No Hit
CCCGACGAGCTGGCCGGTGGCACCTTCACCATCACCGATTACGGTTCGGA160.1092523045407989No Hit
GCGTTAGGGGAAAAGGTCATCAAAGTCATGGGTTTGTACTTACGCCAGCA160.1092523045407989No Hit
CGGCAGCACGGCCAGCCGCGATGCCAAGGTCCCTTGGTCACTGGATGCTT160.1092523045407989No Hit
CGGTGCGCGATGGCATTATCGATCCCGCTCACTCGATCCAGATCGGTATC160.1092523045407989No Hit
CCACATAGGCGATCACGCGGGTGGTGTCCGATGCGGTGCCGATCTGCGCC160.1092523045407989No Hit
GTGCGCGTGGTGGATGGCTACGTCAATTAGAGTATGGGGCGATGAATTTC160.1092523045407989No Hit
CTCGTCGGGCGTGACCTCGTTGTTGCGGGTACGGGCAGCCAGATCGGAGA160.1092523045407989No Hit
GTCTCGGACGACGCCGAACCCGCCGGACGGGAAGCTGCGCGCCTGCGCTT160.1092523045407989No Hit
GCGCGCAAGGTCCGGGTGGTCACCCGGTTCCGCAACACGATCGGGCTGCC160.1092523045407989No Hit
CATCGGGTTGCCGCTGGCACTCAACAAGGTGGAGTGGAACTCCTCATCGG160.1092523045407989No Hit
CTGTAATCCCAGCAGTTTGGGAGGCTGAGGCCGGTGGACCACCTGAGGTC160.1092523045407989No Hit
GGTGCTCGCATCCTGCCCGAAAGTCGGTTCGTCAAGAATCAGCACACGCG160.1092523045407989No Hit
TACGGGTCCTGGCCGAGGATGACGACGCGTACATCGTCCACCGAAGTCAG150.10242403550699897No Hit
CCACGCGTACGGCGGCTCGAGCACTTCACGAGGCGGGGCGCAACGCACGT150.10242403550699897No Hit
CCCCCCGTCATCGCGCCGGGGGTCAGCCGCTCGATCACGGTGAGCGCGAA150.10242403550699897No Hit
ACATTGTTGGGCAACCATCCACACCATCCATCTCCGGAACCCTTTCTGCC150.10242403550699897No Hit
TGCCCGTGCAGCTGCGCTCACGCGACCCCGCCCAGGCCATGCTGACCTTG150.10242403550699897No Hit
GCAGGGTACCGGTCACTGACACGAGATTCCTGGCCTGTTTTTGCAAGGCA150.10242403550699897No Hit
AGACCAGCCTGGGCAACATGACAAAAACCCGTCTCTACTAGAAATACAAA150.10242403550699897No Hit
GTCAAACGTGTGCGAACATCGACTCTGAATAGGCCGCCAGCTCCCATTCG150.10242403550699897No Hit
CATGGATGGCACACTCATCACACCATCCTTCACCAGCCTCTATGGGCAGA150.10242403550699897No Hit
TCGTCGGACAGTCAGACACTGTCCATCGTTCTCAGGGATGACGAGGGCGC150.10242403550699897No Hit
GCGCCGGACGGGGGTAGTGAGCAGCCGCCCATCACAGTTGACGATGTCGG150.10242403550699897No Hit
CTACTTCAGTCTTGCTAGCTTTCTCTTTCTAGTGGGCACTCTTTCATTCC150.10242403550699897No Hit
GTCATTGTCTGTGCGATAGAGAGAGATCATCAAATTATCATCCCAAGTGG150.10242403550699897No Hit
ACGTACCGGGCCTGGGTGTCGTCATCCTGGCCGCCGGGCTGCTGGCCACG150.10242403550699897No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)