FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003634049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC31.89873417721519No Hit
GTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGG31.89873417721519No Hit
AAACTAACCTGTCTCACGACGGTCTAACCCAGCTCACGTTCCCTATTAGT31.89873417721519No Hit
ACCACCATCACGGCCGGGTTGCCGAGCATCAGCACGTTCTGTCCCGCGGG21.2658227848101267No Hit
ATATATTTGCATCTCATTTCAGCAAAATAAGGCAGAACATTTTTTGCAAC21.2658227848101267No Hit
GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC21.2658227848101267No Hit
ATGCTAACTAGTTACGCGACCCCCGAGCGGTCGGCGTCCCCCAACTTCTT21.2658227848101267No Hit
TTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTG21.2658227848101267Clontech Universal Primer Mix Long (96% over 26bp)
TTCTCTGGCCTCAACCTCCCGAGTAGCTGGGATTACAGGTGTGCAGTACC21.2658227848101267No Hit
GCAATGCTCAGTACCCACAGGGTGGTAAACTTGCCTTCTAAGTTAAAGGA21.2658227848101267No Hit
GGCAATCAGCATAACCTCAAATATGGTTGGAAGGGGCTTGTTATAAATAA21.2658227848101267No Hit
GTGGAACAGTCCCTGGCCGACCCCGACGGCGCCTACCAGCGGCTGCGGCT21.2658227848101267No Hit
AAAATATCCTTTGTAATATACTGGCAAACATGGTTCCCTGAGTTCTGTGA21.2658227848101267No Hit
TACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACG21.2658227848101267No Hit
CCGTGGCCTTAGCTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCT21.2658227848101267No Hit
CATTCCTACACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAA21.2658227848101267No Hit
TTGTCCCACCTTGCCATCCTCCAACTTTCTTTTTCCATTATCTCTTGAAG21.2658227848101267No Hit
ACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAG21.2658227848101267No Hit
GCTACTACCAGTGTCTCTGCTATTTTTATAGTTTTATATCAGATCAAATT21.2658227848101267No Hit
GGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGT21.2658227848101267No Hit
GTAATCTTCTGGTCACCTTAATTTCACACTTCTGGCCTCTAGGACTCTGA21.2658227848101267No Hit
CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAAT21.2658227848101267No Hit
GCCCTTTTCCCTTTCATCTTTCTACATAAGGCATGCTCCACACAGAAGCT21.2658227848101267No Hit
ACTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAG21.2658227848101267No Hit
GTCTGATGCGCTGCTCATTGTAGCTCTTGGCCAGGACCACAACCCCACGC21.2658227848101267No Hit
CCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTACCA21.2658227848101267No Hit
GAATCGAGAAAGAGCTATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGG21.2658227848101267No Hit
CCAATATTGTGCCTATTGCCATACTAGTCTTTGCCGCCTGCGAAGACTAG10.6329113924050633No Hit
AGTAAGAAGATCACATAACTAAAAGGCCAGATAGCAGAGTGTTAGAGATC10.6329113924050633No Hit
CCATTTATAAAAGTTAGAACCCCCTTTCAAATATTATATACCAATACTGT10.6329113924050633No Hit
GCGCAGTACCAGCGCGCGCTCGGCGTGATGCTCGGGCCTCCCATCACCGG10.6329113924050633No Hit
CCACTTTAGTGTATTTGTACATAGTCTCTGGGTAAAATATATTCACACTC10.6329113924050633No Hit
GTCTATAACAGATAGCAATGAGATAGTTCTAGCAATAGATGAAGCAAGGG10.6329113924050633No Hit
TTGCCGTGAGCCAAGATTGGGCCACCACTACACTCCAGCCTGGGTGACAA10.6329113924050633No Hit
TCCCAGAGGAGGCAGTCTGCTGAAGGAGCTGCAAATAAAGTGCTAAATAC10.6329113924050633No Hit
GGCCAGTCTCTGAGACAGTTCATCCTGCTCCGCCGAAGCCACGCTCGTGC10.6329113924050633No Hit
CCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGG10.6329113924050633No Hit
GCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCC10.6329113924050633No Hit
CTTCTAAGTTTATTAGAAATTGTTTCTTTATGTGAAATTCAGTTATTCAA10.6329113924050633No Hit
GGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGC10.6329113924050633No Hit
CCATTTTTAGTGGAATCAACAAAGAGATCATCAGCACCTGCCAGTCATTC10.6329113924050633No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG10.6329113924050633No Hit
GTGGAAAAAATGAAAGAAAAGCTTCCAGTTATCATTGACTTGAGGAACCC10.6329113924050633No Hit
ACAGTACCTAACAAACCCACAGGTCCTAAACTACCAAACCTGCATTAAAA10.6329113924050633No Hit
GGAAAGCCATGTACACATAATAGCCAAAACTACAACCACCCAGTGCCTGG10.6329113924050633No Hit
CACACACACACACACACACACACACACACACCTGTCTCTTATACACATCT10.6329113924050633No Hit
CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAA10.6329113924050633No Hit
AACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGG10.6329113924050633No Hit
GCTGTGATGAATGACTTGTACACATGACCTCATAAATATATGTTTGTGTG10.6329113924050633No Hit
GGGCTTGAAGCCCTGGCTGGGTGTTTCCCACTCAGGTTCTTCACGCCCTT10.6329113924050633No Hit
GCATGAGGTAGAGCGTCTCGTCACGAAAGCCGACCACTTCGGCTTCCGCG10.6329113924050633No Hit
ATGTACAATTGCATGGTGCTAAGGTCGACACACGGGTACTGAGCTTGTGG10.6329113924050633No Hit
ATTCAGTTATCTCCACCTGGCCCCACCCTTGACTCATGGGGATTATTACA10.6329113924050633No Hit
GGAGTGGAATTTAGGGGTTTAATGGAATCTGTTTTATATCAAACAAGCAT10.6329113924050633No Hit
ATAGTACTATCCTGCCTTATCACTCACCGCAGCTGAGCTGACTCACCTCT10.6329113924050633No Hit
GTCATCCTAAAAGTCTTCCTAAGAGAAATGACACCTAAGCTGAAACCCAA10.6329113924050633No Hit
GTATATACTTGAGTTGTTGGGTAGAATTTTCTGTAAATATCTGTTAAGTC10.6329113924050633No Hit
CCCATAACTTTGTGACTAAGGCAAGTCCCTGTAGTGCAGTATATTTCAAA10.6329113924050633No Hit
GTGTTGTTGCCATGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCA10.6329113924050633No Hit
CGACTGGGGTCTGCAGAGGACCAGATTGTCACAGGAAGGGAACTGGGTCT10.6329113924050633No Hit
TCTCAAGTGTTCTCACCACACACAAAAATCCAGTAACTATGTGAGGTGAT10.6329113924050633No Hit
GCTTTTACTCTGAATTAACTGGGGAGCATTTGAATGTTTTTTGCGCATGG10.6329113924050633No Hit
TTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGAC10.6329113924050633No Hit
CTCCTCAGCCAAGCACATACACCAAATGTCTGAACCTGCGGTTCCTCTCG10.6329113924050633No Hit
GCGGTGAGCCTTGAAGCCTAGGGCGCGGGCCCGGGTGGAGCCGCCGCAGG10.6329113924050633No Hit
ATGTTGAATATCATGGCCGAGTAGGTGACGCCCCAGATCATCGAGGGGCG10.6329113924050633No Hit
GAACAGAAAATGTTATCTTTGAAAAAAATATGCAGTTATAAAAAGTTGTA10.6329113924050633No Hit
CCTTTCGATCTTCAAGTATCTGTTTGCAAGCTTGGTATCTTAGCTGTTAA10.6329113924050633No Hit
GAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGC10.6329113924050633No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC10.6329113924050633No Hit
ATGCAAATCTTCCTTGTCGATGAAACCATCTCTGTTCTGATCAATCATGT10.6329113924050633No Hit
ACCCGGGAGGCGGAGCTTGCAGTGAGCTAAGATCGGGCCACTGCACTCTA10.6329113924050633No Hit
TCCCCATGCTCGTCTGTGTACTGGAAGGCCTGGACCAGCCGCAGAGCCTC10.6329113924050633No Hit
CTTGCGCGCCGCTCGATCAGGGCGGTGCGCAGGCATTGGCAGACGATCTC10.6329113924050633No Hit
ATATAGACCAATGGAACAGAACAGAGGCCTCAGAAACAACACCACACATC10.6329113924050633No Hit
ATTCTGGATATTAGCCCTTTGTCAGATGAGTAAGTTGCGAAAATTTTCTC10.6329113924050633No Hit
GTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTT10.6329113924050633No Hit
GAATTTGAACAAGTTGTTGCATGGATGGAAGGTGACCAGATTCCAGCTTA10.6329113924050633No Hit
AGATAAATGTTCATTTTACTGATGCACTTTAGTTTTTGGTCTGTTACCTG10.6329113924050633No Hit
GCTCAATCAGTGCATGGCCAGATCTTTCAGAAGGCAAGATAGGTCCTCCA10.6329113924050633No Hit
AACCAGTACCACGAGTCTTACAAGACGCCGCCGCCTGCGGTGAACGTCAT10.6329113924050633No Hit
GCACAAAATGATGGCCTTGAATTTTATCTTCCTGCACATGATCCCCTCTG10.6329113924050633No Hit
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAA10.6329113924050633No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTTTAAGTTTTCCATTTGGTTAAAGC10.6329113924050633No Hit
CTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAA10.6329113924050633No Hit
GATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGA10.6329113924050633No Hit
ATCTTGCATTATCATCTTACCCTCTGTCTCAATATACATGTTATGAAGGT10.6329113924050633No Hit
GTTTTAGAGGAAATGGTACCAGCTCTCTTTGTATCTCTGGTAGAATTCAG10.6329113924050633No Hit
CCACTTTAGTGTATTTGTACATAGTCTCTGAGTAAAATATATTCACACTC10.6329113924050633No Hit
ATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATG10.6329113924050633No Hit
CATAACAAGGAAGGATTTAAACACTTCAAGAAATTTTGCCCATCCTTCAC10.6329113924050633No Hit
CCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCCAGCCCTTCTTC10.6329113924050633No Hit
AGACAGAGTTTCACTCTGTCACCCAGGCTTGAGTGCAGTGGCATGATCTT10.6329113924050633No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACT10.6329113924050633No Hit
CCTTAGATTCAGCTAATCCTTCTAAGACATTTTTTTGTTTTAGTCTGGGA10.6329113924050633No Hit
CTTCAGGACAAAGCTTTAATGCAGTAAGCAAGATTTCACCATCCAGTATG10.6329113924050633No Hit
GCAAGAGTCAGTGTGACTAAAAGCTTAGTATAATCAAAGATTTAAGGAGA10.6329113924050633No Hit
GGCCCGTCTCGCCCGCCGCGCCGGGGAGGTGGAGCACGAGCGCACGTGTT10.6329113924050633No Hit
GTGAGTTCCTTGATAAGAAACAGTGTCATGTGTGATACCATGACAGTGGA10.6329113924050633No Hit
TTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATT10.6329113924050633No Hit
GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG10.6329113924050633No Hit
GGCTAAGGCCGTGGATATCCCCCACATGGACATCGAGGCGCTGAAAAAAC10.6329113924050633No Hit
TACCTACATTGTTCCAACATGCCAGAGGCTGTTCACCTTGGAGACCTGCT10.6329113924050633No Hit
CCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCG10.6329113924050633No Hit
GTCCTGAGAGATGGGCGAGCGCCGTTCCGAAGGGACGGGCGATGGCCTCC10.6329113924050633No Hit
ATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAACCCAGCTC10.6329113924050633No Hit
AACTGCCGCCGGGCGTGATCAAGATGGTGAAGGTGTATCTGGCCGTGAAG10.6329113924050633No Hit
CTCCAGGTGGGCGAGGTGTAAATCCGGGGCTTGTAGGTATCCTCGGTGAG10.6329113924050633No Hit
AATCAATCCTGTGCATTTCCCACTAAGTCTAGCCACTGTCTCTTATACAC10.6329113924050633No Hit
GTCTCACGACGGTCTAACCCCAGCTCACGTTCCCTATTAGTGGGTGAACA10.6329113924050633No Hit
GCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGG10.6329113924050633No Hit
ATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGCGCTCT10.6329113924050633No Hit
GTCTAGTTCCAGTTTGGAAAAATATTCAAGGGAAGAATTCTGATTGGCCA10.6329113924050633No Hit
TCCGAGCGCACCGTGACGATCGGCGTTGGCCACGGCAAACGCGCCGCCCG10.6329113924050633No Hit
GCACTGTACTCTAATGCCATCAAATATACTCTAGGTGCTACCAAAACCAC10.6329113924050633No Hit
GCTGATCGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCA10.6329113924050633No Hit
GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG10.6329113924050633No Hit
CTTTCACGGTCTGTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGC10.6329113924050633No Hit
GAAAATATCCTTCCATGGTGATCTAGGCAACATCATGATGAACCAGGAAC10.6329113924050633No Hit
GTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCC10.6329113924050633No Hit
GAATTGAATGGAATCATCGAATGGTCTCGCATGGAATCATTATCAAATGT10.6329113924050633No Hit
GCCCATAAAAATAAAAAATTATAACAAACCCTGAGAACCAAAATGAACGA10.6329113924050633No Hit
ATTTTGTTGATATCAGTCATTCAAATGAAATAAGCATGAATGTGCATACA10.6329113924050633No Hit
AGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCA10.6329113924050633No Hit
GGCATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAATGACAGCAA10.6329113924050633No Hit
GCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCC10.6329113924050633No Hit
GGACTACAGGCATGCACCACCACACCCAGCTAATTTTTGTGTTTTTAGTA10.6329113924050633No Hit
CTTTCGTCTACAATTAAGATGAAAAAAGGAAAATATCAAAATCCCATAGG10.6329113924050633No Hit

[OK]Adapter Content

Adapter graph