FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003634050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGA31.89873417721519No Hit
GTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCT31.89873417721519No Hit
ATTGAATCAGTGTCCACAAATTCAATTCTGACACTCTCTACCTGGAGGTA21.2658227848101267No Hit
AATCAATAGAAGGAGGTATAATAATTACAAAGAAGGGATTCTGAAGGGCT21.2658227848101267No Hit
ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC21.2658227848101267No Hit
ACTTAGAACTGGTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAA21.2658227848101267No Hit
AGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCG21.2658227848101267No Hit
GTATACTTCTGTGAATCATGACGTCCCAAATCCTAAAGAATTCTGGTTGT21.2658227848101267No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA21.2658227848101267Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GGCCAACACGGTGAAACCCTGCCTTTACTAAAAATACAAAAATTAGCCGG21.2658227848101267No Hit
ATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACCA21.2658227848101267No Hit
CTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCCTGATGCCTCCAGCT21.2658227848101267No Hit
GCATTCCTTTCACGGCGCAAGCTCATCATGGCAGGAGGCCTCGCCCTTGC21.2658227848101267No Hit
CCTGGGCGGCCAGCGCCTCCCAGATCTTGGCGGAGCCGAGCATGGGGGCG21.2658227848101267No Hit
CAGTTAGGCATAGAGTAACAAGGCAGCTCTATCCTTAAATGATCATGGCA21.2658227848101267No Hit
CCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGAATTA21.2658227848101267No Hit
ATAGAAAGACCAGTCCTTGCTGAAAGACAAGTCTGAATGCTCCACTTTTT21.2658227848101267No Hit
GACCACAGCCTGGGCGTGGTGGCTCAATCCTGTAATCCCAACACTTTGAG21.2658227848101267No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCA21.2658227848101267No Hit
ATTCTTGACTCTGATATGTTAAATTCAATTGCAAATGACATTAACCATCC21.2658227848101267No Hit
TTCATAGCGACGTCGCCTTTTGATCCTTCGATGTCGGCTCTTCCTATCAT21.2658227848101267No Hit
CCCCCTTCGCGGGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGG21.2658227848101267No Hit
ATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATC21.2658227848101267No Hit
ACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACG21.2658227848101267No Hit
CATAAACGTGACCTGAACAAATACGCTCCCCTGCATGTTCTTCCTGAATT21.2658227848101267No Hit
ATCTTAAAGTAAGCAATGTTGGCCATAATTTCAATATTCTAGCCTTGCCG21.2658227848101267No Hit
CAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGA21.2658227848101267No Hit
GGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCT10.6329113924050633No Hit
CTGCGCCCGCTCATAAGGGGATGGCCATGGCTAGGTTTATAGATAGTTGG10.6329113924050633No Hit
ATCCAACTACGAGCTTTTTAACTGCAGCAACTTTAATATACGCTATTGGA10.6329113924050633No Hit
GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCGGCCCCA10.6329113924050633No Hit
CCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGT10.6329113924050633No Hit
GGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGT10.6329113924050633No Hit
GAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTG10.6329113924050633No Hit
GGACAGGCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCT10.6329113924050633No Hit
ATTCCAATTACAGGGCCTCGAAAAAGTCCTGTATTGTTATTTTTCGTCAC10.6329113924050633No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTCTCTTATACAAATCT10.6329113924050633No Hit
ATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC10.6329113924050633No Hit
AAGTGGGCCTGATCGTCGGTGAGTCCACCGACGACCTCGTCGAATCCTAC10.6329113924050633No Hit
GAGATGAGATCCTGGAATCACCTGGAAGGTAAAACAAAGGCATTGGCCTT10.6329113924050633No Hit
CTTAGATGTCCGGGCCGGGTGAGGTTTCCCGTGTTGGGTCAAATTAAGCC10.6329113924050633No Hit
TCCTATAGGTTGCCATGGCCTTTCAGAGTTCTGTTTTTATTAGCTGTTTC10.6329113924050633No Hit
CTTCAAGAACATCCTGGTAGACGAGATGGACATGATGCACGCCCGTGCAG10.6329113924050633No Hit
AAGTGACCGAGCTAAAGCCGAGCAAGTCGCGGCCGAACGCGGGCATCGTC10.6329113924050633No Hit
CAGTCCTAAATATATATGCACCTAATACTGGAGCTCCCAAATTTATAAAA10.6329113924050633No Hit
ACCTGCTCTTCCTTCATGTCAACTGATTCATTCAGTCCTTGCAAAGGCCC10.6329113924050633No Hit
CCCAAAATGCTCGGATTATAGGCATGAGCCAATGCCCCGGCCAGAAAAGC10.6329113924050633No Hit
GAGTTTTGCTCTTGTCACCCAGGCTGGAGTGTAGTGGTGGCCCAATCTTG10.6329113924050633No Hit
GGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAA10.6329113924050633No Hit
CCACTGACCCCACAGAAATACAAACGACCATCAGAGAATGTACTACAAAC10.6329113924050633No Hit
GCCCCGAGGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGCGCGCCGGC10.6329113924050633No Hit
GTTATAGCCATGACTGAGTGCCCAATATGCCAGCAGCAGAGGCCAATACT10.6329113924050633No Hit
GACCTGGGTCTGCAGGCGTCTCTCTAAGAAATCCTCTATCTTCAGGCCCA10.6329113924050633No Hit
TCTTACGCCTAGTCCTCTATCCTGGGCCTTTTTATCTCCTCTACCTCCCA10.6329113924050633No Hit
ATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCA10.6329113924050633No Hit
CCCTCATGCCTGTCTAATTTTTGTATTTTTTGTGGAGATGGAGTTTCACC10.6329113924050633No Hit
CCAATATTCATTGAAGATAACCATTTTATGAATCAATTAATGAATTCAAC10.6329113924050633No Hit
GGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCC10.6329113924050633No Hit
CCATTAGATGATGTCTCCTTTCATTTCCATTCAATGAGGATTCCATTCGG10.6329113924050633No Hit
TTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGG10.6329113924050633No Hit
GTGTGTGTGTGTTCAAATTAGCAATAAAAAATTTGCTATGTTTGGAACAA10.6329113924050633No Hit
ACTGTGCACTGGTTGTGAATAGGGAGAGCCAAAAATTATGTCCTACTGGT10.6329113924050633No Hit
CCTTCACAAAGAAAAGAGAACTCTCCCCGGGGCTCCCGCCGGCTTCTCCG10.6329113924050633No Hit
AAGTAGGCCAAAACCCATCACAACTATTATTTTCTTCCAAAGTTTTAATA10.6329113924050633No Hit
GTTCCCGACAGGCAGTTGGTCACATGGGTGATGAAGGTCGTGAAACCTCC10.6329113924050633No Hit
CTTCCATGGCCACCGTCCTGCTGTCTATATCAACCAACACCTTTTCTGGG10.6329113924050633No Hit
ACGCAAACATTTCAGGTTTGGCATTGTCCGTGTCTCCCCATTTTACTTCT10.6329113924050633No Hit
CGGTTTGCTTGTTCCCAAATGGGAGGAACAATGAGTTTTACCAGGCCCTT10.6329113924050633No Hit
CCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTAC10.6329113924050633No Hit
GTCCCCCTTCCCCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTG10.6329113924050633No Hit
AAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGG10.6329113924050633No Hit
GTGTCCTGCATATGTGACACCATCTAGTTGACAGAATCATTCCACTCGAT10.6329113924050633No Hit
CTTCTAGGAATACTAGTATATCGCTCACACCTCATATCCTCCCTACTATG10.6329113924050633No Hit
GCCTTCTAACTGGTCTCCCTACTACTACATAGCTTTCTACTGTCTATACT10.6329113924050633No Hit
GGTTAGCTCCTTTCAAGCAATTCAAAGGTCAAGTTCCCATGTAAGGAATC10.6329113924050633No Hit
TTGTTACATTTTACACCCGTAAAGCTGCATTAGAAGCTCAGAATGCTCTT10.6329113924050633No Hit
GGGTGAGGGTCCTGCAGGTGGTTCTCCTCCACAGAGCCAGGAAAGAGGAT10.6329113924050633No Hit
GCTAGAAGAGAGTGGGGACCAATATTCAACATTCTTAAAGAAAAGAATTT10.6329113924050633No Hit
TCCTGATATGAAACAATGATTTGTTGTTTACCTGAAATACAAAGTTAACT10.6329113924050633No Hit
GCGGGGTCCGCCGGCCCTGCGGGCCGCCGGTGAAATACCACTACTCTGAT10.6329113924050633No Hit
ATATGAACAAATATAGAAGGCAATTTTCTTATTTTTTCCTGAAACTGAAA10.6329113924050633No Hit
ATTAACAGGTTTAACAGAATGTATCTCCTGATCTATTCCTTTCACTGCAG10.6329113924050633No Hit
GTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTG10.6329113924050633No Hit
GTTTATGCCCATATTTATCACCAGCACTTTGATTCTGTGATGCAGCTGCA10.6329113924050633No Hit
CCACGCCTGGCTGAAAGCTTGAGTTCTTAACCAATGGGTAATATTGCCTC10.6329113924050633No Hit
ACAAAGACCAAGACCAAGAAGCGCCCTCAGCGTGCAACATCCAATGTGTT10.6329113924050633No Hit
TTAATATTCATCAGAAAATGGATAAATAGGGGGGCCAGCAAAAATATAAA10.6329113924050633No Hit
AGATGGTTCGATTAGTCTTTCGCCCCTATACCCAGGTCGGACGACCGATT10.6329113924050633No Hit
TGGCTAGACTTAGTGGGAAATGCACAGGATTGATTCTGTCTCTTATACAC10.6329113924050633No Hit
GGTCCAAGAATTTCACCTCTAGCGGCGCAAGACGGACCAGAGCGAAAGCA10.6329113924050633No Hit
CCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTG10.6329113924050633No Hit
GCAGTGGCTGCCAGGGTCCAGACGGCGGTGACGATGGGCAAGGTTACCAA10.6329113924050633No Hit
TTGAGAAAAGAACGCCAGAGGGAAGAATTTGCACCTAGACTGGGAGTACA10.6329113924050633No Hit
ACCTGGCGGTGCCCAGCGAGCTGGCCCTACTGAAGGCCGTGGACACCTGG10.6329113924050633No Hit
CACCAATAGAGACAAATGGTGACTTTGCCTGTTACACCATCAGCACTACT10.6329113924050633No Hit
ATCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTG10.6329113924050633No Hit
TTAATATTCATCAGAAAATGGATAATTAGGGGGGCCAGCAAAAATATCAA10.6329113924050633No Hit
GTGGCAGACTATGAAGAAACTGTAAAGAAAGCAAGAGAAGCATGGAAAAT10.6329113924050633No Hit
GGATTGCGCTGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTG10.6329113924050633No Hit
GTAAAAGTCAAAGTGCGAGTCAACACCCATGGCATTTTCACCATCTCTAC10.6329113924050633No Hit
ATATAGATAAATATATTTCCAGATTTACCTTTTTAAGAATTGCTTCTAAG10.6329113924050633No Hit
ATTTGACTCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTG10.6329113924050633No Hit
GTGGAACTTGCGGATCTGCACGCCGGCGCTTTCCATCTCGCGCACGAAGT10.6329113924050633No Hit
GATATAGACAATTGCCTAAATCATTAGTCACTGTGAAATCTTCAAGATTT10.6329113924050633No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA10.6329113924050633No Hit
CGCCTGAACTGGTCCTCGCGGGCAGCCCGTTCGCCACTGGCGCGCAGGCC10.6329113924050633No Hit
ATGTTATTCTCCCCCTTTATAAGCATTGTGAACCTAAGGAAAAAAAAAAT10.6329113924050633No Hit
GTTTTAGGTCGTAAGTTTAAGTCTTTAATCCATCTTGAGTTAATTTTTGT10.6329113924050633No Hit
GTCTTAGTACTATTTCTAAATGCTGGTTCTTCAAGTGGTATTTGAGTTTG10.6329113924050633No Hit
TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTTCCCGCGCGTCA10.6329113924050633No Hit
GACAAGGACTTAATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAA10.6329113924050633No Hit
ATCTCTAACACTCTGCTATCTGGCCTTTTAGTTATGTGATCTTCTTACTC10.6329113924050633No Hit
CTTCAGAAAAGACATGTAACCCAGAGAGCTGGGAGTGTAGATCTTGAAAA10.6329113924050633No Hit
GACATAACACCTTCTTCATTTGGAACTTGATTGTGGACTTCACCTCATCC10.6329113924050633No Hit
GGGAATCTTAATGATCATTTGGTCCAGTCTCATTATTTTAGAGATGAAGA10.6329113924050633No Hit
CACTCATCTTGATTCAGGGTGCTTTTAGCACTACTTCCTCCTAAAGGGAC10.6329113924050633No Hit
ACCATATTCAAGGCAGGCCAGGAGCAGTGGCCCATGCCTGTAATCCCAAT10.6329113924050633No Hit
GGTACGGCCCGGCGCGAGATTTACACCCTCTCCCCCGGATTTTCAAGGGC10.6329113924050633No Hit
GTATTAATAGGCTTAATAATTGTTGGCAAGGATCCTTTTGCTTTCTTTGG10.6329113924050633No Hit
GCTTGGATCAACACCCCCCGGAAAGAGGGAGGCTTGGGCCCCCTGAACAT10.6329113924050633No Hit
GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT10.6329113924050633No Hit
CTTACCCCAACCGGTAAGCTCACCCGCGTGAGCGGCCTCATCCTCGAAGC10.6329113924050633No Hit
GTGTTGACGCGATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAG10.6329113924050633No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC10.6329113924050633No Hit
ACACTGGCGTCGCGAACGGCACGCCCTTCTTCAGGTTCTCGGCCAGCTCG10.6329113924050633No Hit
ATCAAGTACTCAAATAAATTCACAGTGATAATTATAACAAAAGTTATTCA10.6329113924050633No Hit
CCAGTGAATTTTATAAATCATTTTTTCATGCAGGAAGATTATTCCCTTTA10.6329113924050633No Hit
CTGTCATCAGCTTCGGGGCCCAGGGTTCATGTCCCACATTTTATTGTGCC10.6329113924050633No Hit
CAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGG10.6329113924050633No Hit

[OK]Adapter Content

Adapter graph