FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGTGCCG210.526315789473683No Hit
GGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGA210.526315789473683No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACC210.526315789473683No Hit
GGCTCACTGGGAATGGGGAGGAGCGTGTGGTAAGCCAGACCTGCGGCGAG15.263157894736842No Hit
GTCCTGTATAGTGAGGCCGGGCAGGGTGAGGGAGGCATCCCTGGCCATGC15.263157894736842No Hit
GTCATCTATTGAACCAGATAGATCAGGCAAGCTGGAGGGTCTTGACTGAA15.263157894736842No Hit
GAGCAGATCCAGCTGAGCTTAGAACAATATTTTTGAAGTATGCAAGCATT15.263157894736842No Hit
ATCCCGATCTTTTCCCTATCTAATTCACCTCCTATTAGGAGCCGATCGTG15.263157894736842No Hit
ATGTTGACCAGACTGGTCTCAAACCCCTCGCGATCTGCCCGCCTCGGCCT15.263157894736842No Hit
GAGGAAAAGTTCGTTATGGACTGATCCCTGAGGAATTCTTCCAGTTTCTT15.263157894736842No Hit
GTAGCTGGACAGGATGGGCAGATAGATGCTGATGAATTGCAGAGATGTCT15.263157894736842No Hit
CACCAGGGGCCTCGGGCACTTGTGGGGATTCGGGAGCTGGCTCTTCAGGG15.263157894736842No Hit
CTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGA15.263157894736842No Hit
GTTCTGAAAGTTCTAATTGCGTATTCATTGCTTCTTCCAGCTGCTTTTGT15.263157894736842No Hit
CTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCAT15.263157894736842No Hit
TACTAGAAGTGTGAAAACGTAGGCTTGGATTAAGGCGACAGCGATTTCTA15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)