FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTCGTACTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG210.526315789473683No Hit
GGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGC210.526315789473683No Hit
GCCCGAGCCATGAACACCGAAATGTATCAGACCCCCATGGAGGTGGCGGT15.263157894736842No Hit
ATTTAGAACATAGTATGACCCACTTTGACAAATTACTTAAAAAGCACTAG15.263157894736842No Hit
CTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACACTCAGCTA15.263157894736842No Hit
GCCTTGCTCCATGCTGACTGCAGTGGGAAGGAGGTGACCTGTGAGATCTC15.263157894736842No Hit
CAGATATATGATAGTCCAGGCGATTCTTTACTTCCTTATATACTCTATAC15.263157894736842No Hit
ACACCTTGCTGAGCAGTATCCCGTCTTCGAAAGCTGTCTGTAAGAGCCCT15.263157894736842No Hit
TACTGAGTTAAACCACTTCATTAGGGCAAGTTACAACTTACAGCTACTAG15.263157894736842No Hit
GTCTTGGGCCCCGGCTCTATTCTGGGCTGCGGGCCTGGGAAGGGCTCGCC15.263157894736842No Hit
CTGCCTATTCCCAGCAGCGCTTCCCTCCACCGCAGGAGCTATCTCAAGAT15.263157894736842No Hit
CTCATCAAGTTTGCCAAGAAACAGATGATGCTAATACAGAAAGCTAAATC15.263157894736842No Hit
ACCTACAACTTGCGCCAATTATCGAGCTGGTAGACGACCAGCGCTGACGA15.263157894736842No Hit
GATCAGCAGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGTAC15.263157894736842No Hit
GATCAGCAGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGAAC15.263157894736842No Hit
GAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTT15.263157894736842No Hit
ATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTA15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)