FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634199

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634199
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGGGAGTACCACGTACCTGCGTGGTGGTCGGTTAGTTCGGTTGCGAG318.75No Hit
ACCGAAAGCAGAGGACGAAGAAGGGCGTCATCTCATATACGGCGTCAGCA212.5No Hit
ATCTTTGTCGGTATGACGATATCCATTACAGTTGATGGATTCGTCATTCT212.5No Hit
GGGCGACTGGGCAGGCAAGGAACGCGCAGGTAAGCCAGGCAAGCCCGGCG16.25No Hit
ATAAAAACAGTGATTTTGGAGGGAACTAGAGGCTGACGCCATGCAGATAT16.25No Hit
TACCAGTACAATGGCTATGGTTTTTACATTTTACGCAAGGGGCAATTGTG16.25No Hit
CATTGGAGGTGCCCCCACGGACAAACCAGGCTGGGAAGCTGCGGGAGCTG16.25No Hit
GTCTACAGTCAAAGGTCCGTCGACACCAAAGTCTCGAGACAGGTATAGGC16.25No Hit
TCCCTATTTTGAATCTTAACACACCGCAAATACCCGGTATACTTAGTCCT16.25No Hit
CTTTTCTACCAGGCTCTGAGCCTTGGTAATTGCATCGTCAAAGTCTTGAG16.25No Hit
ACGTGACTGCGCAGCCGGACCAATCTCCGGTAAATATCAGTCATCACTTG16.25No Hit
GCGACACGCCGACCTCTCGTGCTGCGACCGAGCCCCGGACCCCGGACCGG16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)