FastQCFastQC Report
Tue 10 May 2022
EGAF00003634257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1250181
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCT18550.14837851479105824No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG17050.1363802521394902No Hit
GGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTA14340.1147033909489906No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)