FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003634273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTCGGTGATGCCCATCACTTCGAACACGGCGCGCATCGGGCCGCCGGC34.838709677419355No Hit
GTCGAGGCTCGCGACATTGTCAACTGGGCGAACCCGGATTACTACTGGCG34.838709677419355No Hit
GAAATAAGCACAACAGGACTTTGACATTAGGTGTTTTCCTCTGCTAGATC34.838709677419355No Hit
CACCTTGCGACCGGTCGGGTTGATGCGCTCGCCGATGATCACGAACGGCT34.838709677419355No Hit
ACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTC23.225806451612903No Hit
ACATATCAGTGAGAACATATGATGTTTGGTTTTCCATTCCTGAGTTACTT23.225806451612903No Hit
AACGTGGATACCCCCGAGCGTGCGGCCAGGTGTCTGGCGCTGGGCGCGCA23.225806451612903No Hit
ATCGCGGTGGGGCTGGTCGCGGTGCCGTTCGGGCTGCTGGCCTGGGGCCT23.225806451612903No Hit
GTACCCAGGACTTCTCGCCCACCAGCTGCTGCTCCCGCAGTTTCAGGGTC23.225806451612903No Hit
GTGGAAATGTTACTTCCATTGAGAATCACTATATTTTTCTGCAGTGTGTA23.225806451612903No Hit
CCTCTCGTTCGCGGCATTGTTCGTCGGCCTCGGGGTGACCGGCGGGGACG23.225806451612903No Hit
ACCCCAACGGCTACGAGCTCCGCGCGTCAATCCTGGCGGTCGGCGACGAG23.225806451612903No Hit
CACCGGCACCTTATCTGGCCACAAACCTGAAGGCGGCTCTATCACCACGA11.6129032258064515No Hit
CCGTGTACCCGATCACCGAAGCCGTGGCCGAGGAGTTCCAGAACGCCAAC11.6129032258064515No Hit
ACCTGCTGCTGCGGGCCCAGTCCGCGCTGCCCGGCGCGACCACCGGCGAG11.6129032258064515No Hit
GGCGGGGTCGCCCTCGCCCGGTCCGTCGAGGTGCGCGAGCACCCCGACCT11.6129032258064515No Hit
GATGAACTTGGCGCCGTCGAACCCGTTGCCGAGGTCGTCGAGCGACAGGA11.6129032258064515No Hit
GAATATGAGTAATTTAGAAGATACAAAAGCACAAATTCCGTCCGTATTTT11.6129032258064515No Hit
GTACATGGCCCGGGTCGTGAAGATGACCGCGATGCCGCAGCTCGTCTCGC11.6129032258064515No Hit
GTTCTTTGCCTACCTAGCCTGTTTCTCTCTGAGGAGCTTAATGTTTTTTG11.6129032258064515No Hit
CATTAGAAAAAGAGAGAGAAAGAGAGAAAAAGAAAAAAAGAAAAGAAAAG11.6129032258064515No Hit
GGTCAACATCGGGGGCGTCACGGTCAGCCGGGCGACCCTCCACAACGAGG11.6129032258064515No Hit
GCCTCACCGAGCTCTTCCTCACCAAGCTCGACATCCTCGGCTCCTGGGAC11.6129032258064515No Hit
CAAGGAGCATGTCTAGGAGTCCACGGAGGCAAGCAGAGGCAGGAAGAGGA11.6129032258064515No Hit
CTTGATCACCGTGACGCCCTCGAAGTCACCGCACTGCATTCCTTGGCCGG11.6129032258064515No Hit
CTTGTGGACGTATCACTCTAGTCTCTGCCTCCATCTTCACATGCTTTTCC11.6129032258064515No Hit
CGCATCGACCGTGCGCATGACCAGGTCGAGGTCGTCGGCGGACAGGCCGT11.6129032258064515No Hit
CGGTTTTAGATTAGAGACACTGGCTGGATTGAGGAGTAGAAGGCTCAAAC11.6129032258064515No Hit
GTTGGAGACCGGCGCGGAGGTCGTTGCCATCGAGATTGACGAGGTGTTGG11.6129032258064515No Hit
CTTATACACATCTCCGAGCCCACGAGACGTGCCACCACATATCGCGTATG11.6129032258064515No Hit
ACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTC11.6129032258064515No Hit
TCGCCGAGCGCGTCGCGCAGGAGGGCATCGACCTCCTCGCCGCGCAGCAT11.6129032258064515No Hit
TAACCCAGGACTTCTCGCCCACCAGCTGCTGCTCCCGCAGATTCAGGGTC11.6129032258064515No Hit
AGGCCAACCCGCCCTTCGCGAACCTGTCGTTCAACAACGCGACCGACAAC11.6129032258064515No Hit
CGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGA11.6129032258064515No Hit
GACCAGGACTGGGCCCAAACCCACCCCCGGGAGCTGACCCGGATCTACCT11.6129032258064515No Hit
ATGCACTGCTACTCCGGTGATGCTGACCTGGCCCGGATCTGCTTGGACCA11.6129032258064515No Hit
TCAATGCTTCTTAGTGGCTTATGGGAGATGTAGGAAAAGGGATACTATAA11.6129032258064515No Hit
GGCTGAGCCAAGGTCGGGCTAACAATGACGTCGAACCGCTGCCAATGCTG11.6129032258064515No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAACTCTGCGTTGAAACCA11.6129032258064515No Hit
GTGCAGTGGTGGGATCTTGGCTCACTGCAGCCTCGACCTCCTGGGTTCAA11.6129032258064515No Hit
CGTGTGTGGGTTGGTGGCCCGCCCGGAGGGATTCGAACCCCCGACCTACT11.6129032258064515No Hit
CCACTGCACAGACCCATGCCTGTGTCAGGGAGAGAGAAGGGAGCAGGTTC11.6129032258064515No Hit
ACTCCGTATAGACCTTAGCTGGGTGCTTCTCTAGGGAATCGAGGAATTGC11.6129032258064515No Hit
GCGTAGGCGGGGCCGATGCCCTTCCGGGTCGTGCCGATCTGCTGCTCGCC11.6129032258064515No Hit
GCTGGGTGGAAAGCCGAATTGGAAAGCGGTGAGGTAATCTACTCGCGTCA11.6129032258064515No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)