FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length100
%GC68

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGTGGGACCGTGCGCATCACCGGTGCGGCGAAGAACACGGTCACGAGAC214.285714285714285No Hit
GATGTACTGGTAGCGCATCCCGTAGACGTTGCGGAAGAGGATCGTCTTGT214.285714285714285No Hit
CCCCATCGCGACGAAGCCTCTCGGCTTGCCGAGGTCGCTGCAGATCTTCG214.285714285714285No Hit
CATGAGAACCGTGGCGCCCCCACACTCAGTCCGCGGCGCCCAAATCGAGC17.142857142857142No Hit
GGTCACCGCTCGCGAACGTAGGCGCGGTGGCCGGCGCGCTCGCGGTCACG17.142857142857142No Hit
GAATCACCCCCTCTGTCGTGCGACGTGCCCGCGGGCTTCCCCTAGCCGAC17.142857142857142No Hit
CGGTACCCTCTTCGAGCCCATGCGCCACCAACGCAACCGCTACCAGCTCT17.142857142857142No Hit
GAGTGCGGTCATCGCGCCAACGATGGTGGGCGCTTGTGACATGTTTGTGT17.142857142857142No Hit
CTACGTTCTCGTCCGACGTCAGCATCACACCAGAAGCGGCCAGTTCACGC17.142857142857142No Hit
TGCCATGTCCGAGGACCTCCTTCGCGAGCGCCCGGTAGGAATGGGCCGCG17.142857142857142No Hit
AAGGGGATCCGCTCGCTGCTGGGCGTGCCGCTGCTGGTCGAGCAGCGGGT17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)