FastQCFastQC Report
Tue 10 May 2022
EGAF00003634321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35621
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA810.2273939530052497No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT550.1544033014233177No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG540.15159596867016648No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT520.145981303163864No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT520.145981303163864No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG500.14036663765756155No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC480.1347519721512591No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA410.11510064287920047No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG400.11229331012604923No Hit
TCCTTCACGTGCGCGACCAGGAAAGCACTCGCTAGCGGAGTGTCGGCTTC390.109485977372898No Hit
GTGCGTGCCCACTGGCCGATCGAGGACGACTCGTTGCGGCTCGTGATCCT390.109485977372898No Hit
GTTCCAGCTCGCGCAGAAGTACCAGATGCTCGATGCGCCCCTGCTGCTCG390.109485977372898No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC370.10387131186659554No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA370.10387131186659554No Hit
GTCCCAGTGGAACTGCACCTTCACGCGGCCGTACTGGTCGACCCAGATCT360.10106397911344431No Hit
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG360.10106397911344431No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)