FastQCFastQC Report
Tue 10 May 2022
EGAF00003634347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1072660
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20250.18878302537616767No Hit
CTCTAAGCCTGTCCACGAGCTCAATAGGGAAGCCTGTGATGACTACAGAC15530.14478026588108067No Hit
ATATAAGCCTATGTATTTCAGTAATGCTGCTACAGGGGGATACAAAATCA14390.1341524807487927No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13310.12408405272873045No Hit
GCCCTACATGGCGTCGGTGCAGCTGAACGGCGCGCACCTGTGCGGCGGCG12370.11532079130386144No Hit
GTCCAGCACTGGCAAGAGCACGTGCTGCAGGCTGTCCGGGCGGCGGCCCG11820.11019335110845935No Hit
GTATATAAGCCTATGTATTTCAGTAATGCTGCTACAGGGGGATACAAAAT11040.10292170864952548No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG10820.10087073257136465No Hit

[OK]Adapter Content

Adapter graph