FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003634538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences184
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCACTGGACGCCATGGTGGGCGACTCCCCCGCCATGCAGGCCGTCAAG31.6304347826086956No Hit
CAAAATTGGAGTCATTCCCCAAGGAAGGGACTGGGTTTGGCCTGAGAGGG31.6304347826086956No Hit
ATGAGAATGCTTCTGTCTAGTTTTTATTTGAAGATATTTCCTTTCTCACC31.6304347826086956No Hit
GCTTGCTAGCATGAGTGGGATGGCGAGGACTCGCATCACAGAGGAAAGGA31.6304347826086956No Hit
GTTCAAAGCCGGTGGTGCACGTTGATGCACAAGCTGACATGCGTGACAGC31.6304347826086956No Hit
GAGGCTGCTTCATCCTCTGAGGCTGTTAGCATCCTGGTTGGGCTTTGGTG31.6304347826086956No Hit
GCCTTTATTCAAAAAGAAAAGCACTGTTGATTTAAAGTCTGTTTTGTCTG21.0869565217391304No Hit
GTGTACGATACCTGCAGTGCAGCAGGCACAGCTTTTCCCTACTTTGTGTA21.0869565217391304No Hit
GACACACATACGGCTTAAAATAAAAGGATGGAGGAAGATCTACCAAGCAA21.0869565217391304No Hit
CCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATC21.0869565217391304No Hit
GTCTGCACCGATACGAAAAGCCGAGACCGAGCCGGCCTCGAACTCGTTGG21.0869565217391304No Hit
CCAGTGCTCTGAAGGAATTTATGATATGATGAGGCTTCATTCCTTCTTGC21.0869565217391304No Hit
CCTGTAATCCGAGCTACTTTGGAATCTGAGGCATGAGAATCGCTTGAACC21.0869565217391304No Hit
CCTCCCGCGCGGGGGCGTGTTCAATGAGGGCGACCAGCCCCTGCCGCTCA21.0869565217391304No Hit
CTTCTTTAGCTGGTAAAAATATATTTTGGTTTAATACATTAAAGTCTTGT21.0869565217391304No Hit
TAACGATGATTTCGCAAAAATGAATGCGGGATCGCTTGACACCCAATCTT21.0869565217391304No Hit
GGGCTTGGCATATGGTCATTTAGTTATTTTTTTTCAGTGAATGTTTGTAC21.0869565217391304No Hit
TATTGAGATGGTTTCCCACTCATCTTGACTCAGAGTGCTTTTAGTGCTGC21.0869565217391304No Hit
CTGTTCTTCCTTCCAATAACTATAGCACCAGTTTTATCATAAGAAAATAA21.0869565217391304No Hit
GGGATCTGTCCTACATTTGGGGCTTGAGTAGCAAAAGGCATTAAAACATA21.0869565217391304No Hit
GTTCATGTTAGTACCCACATCCAAAGCCTCCCAGAACCCCCTTCGCAGGC21.0869565217391304No Hit
CCAACAACTGGCCCTCGGGTATTCTAAGAGCACTGATTCACTTATCAGAT21.0869565217391304No Hit
CTTTTGAGTTTGTTCAGCTTTTTACTTAGTGTTAGAACCGAATGACAAAT21.0869565217391304No Hit
CAGTAAAATGTTTCCAAGACTATTTTTGCAATTTTTCAGTCTGTAAGGAC21.0869565217391304No Hit
GTACGTCAGCTGCGAGGGAACATGCTTCTTGATACTTGCGTCATAGACGC21.0869565217391304No Hit
CCGTAGGGTACGGCGCGCTTGAGCTCCGTGATAACCGAGCAGCCTGTGCG21.0869565217391304No Hit
GAACTCCTAGGCTCAAGAGATCCTCCCACCTCGGTCTCCCAAAGTGCTGG21.0869565217391304No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC21.0869565217391304No Hit
GTTGTATTCCAGAGGTTTTGATAACTTGTGTCACTATTACCATTCATTTC10.5434782608695652No Hit
CCCTTAGCACAATTGAATATTGTCAGTCCTTTAAATTGTCAATTGTTTGT10.5434782608695652No Hit
CCTTTAATGCTCTAGAAAGCAGGAATTTTTCCATAATTGGAATGGATGGA10.5434782608695652No Hit
ACGTGGGGCTGGGCGGTGCTGCAGTTCGAGCTCACGCCGCAGGACAACCC10.5434782608695652No Hit
ACACTCTTTACGCCGGCTTCTATTGACTTGGGTTAATCGTGTGACCGCGG10.5434782608695652No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTATAACACAGCC10.5434782608695652No Hit
CAGATATATAGTCTAAAGAACCTTGGGATTCACTTTGAGCCACTGACAGA10.5434782608695652No Hit
GGCTCAGCCGCGATCCGGCACAGGTCGATGCGTACATCGCCGATCCGCTG10.5434782608695652No Hit
CTAGAAAGATAAGGAAAATTCCCACAAAACTACAGCAAACATCATTCTTG10.5434782608695652No Hit
AAAGGAAGGATGACCTATTTTACATGGACTTTATGAGAGGCTTTAGAGAG10.5434782608695652No Hit
GAGTTAAATAGGCTACATTGATGCAGAAGTCCAGATTTTAGGCTTTTACT10.5434782608695652No Hit
AGCATGACCGGCGTGGCGGGGGATAGGGGGCGGGGGGCGCATCAAAGCCC10.5434782608695652No Hit
TCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAAT10.5434782608695652No Hit
CCACCAACATGCTGCCTCAGGCCCCCAACTCATTTTCGTGTTCATTGCCC10.5434782608695652No Hit
ACCGTGTACGGGCCGCAGGCCTGCCAGCGCGCGCACTGCGCCAGGGCGGC10.5434782608695652No Hit
CTAGAGTTTAGTACTTACAGAAGTAGACCTGGCTAAAAATTAAGAGATCA10.5434782608695652No Hit
ACCGTGCACCGTGTTCAGGATTGGGGTCTCAACCTCGGTGAAACCTTCCG10.5434782608695652No Hit
GTATTGATGCCCTGATCAGCCAGGACTTCCAGGCTGCCACTGAGTATGCT10.5434782608695652No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTA10.5434782608695652No Hit
GGCATGAGCCACCGCGCCTGGCCTGACCTTGTTGATTTCTATACAAAGAC10.5434782608695652No Hit
GTTATTAGTCAACCACTCAGCTAACCAAACAGAAACTTCAGTGGCCACAC10.5434782608695652No Hit
ATCGCTGTTCAGATGGCCTGCCAAGAGAATTCATCCAGCAAACTGTCTTT10.5434782608695652No Hit
CATTGGAGTCATGCCAATGGCAATCAGCCATTTGCTTCATGACATGTGCA10.5434782608695652No Hit
CCCCAATAGATAATCCAATGAAGGCTGTGAACCAAAACTGCGGGTAAAGC10.5434782608695652No Hit
GATTGTGAAATAGAAATGCCTGAAGAACTGTCAGCGTCTGATTCAGCTCC10.5434782608695652No Hit
GACTGGACCCATACAATGTACTGGCCCCAAAGGGAGCTTCAGGCACCAGG10.5434782608695652No Hit
CCCTCAGCACTTTCTCTTCACTGGATCTGAGCTCTGAAATGACTTATATT10.5434782608695652No Hit
CTTGCACCCTTGTGTGTGCTGTCTGGGCTGGAGTGAGGTACATTTCGCTC10.5434782608695652No Hit
GACAAGTACCGGCAGCACAGTCATCGGCAGCACAGGCAGCAGCCAAAGTC10.5434782608695652No Hit
CCATGGAAGAGAGAGGGGTGCTGGCCTGGCCACAGCACGGTGGCAGGGAT10.5434782608695652No Hit
TAATAGTATTTACCATTTTGCTACCTTAATAAACAAACCGCTACAATGAG10.5434782608695652No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT10.5434782608695652No Hit
ACCTCTATGCGCTCGCCAGCGGCGTGGCCTGGGAGATCTGGTTCACGCCC10.5434782608695652No Hit
GCGTTTTCTTGTCGGCCGCCCGATCTCTCCGATCGTCATTCGCCACATCT10.5434782608695652No Hit
GTCGCCGGGGAGCATCGGGCCCTCCGGCAATCCCGCCGCCTCGAGCTCGT10.5434782608695652No Hit
ATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGGTCAGG10.5434782608695652No Hit
CAGGAGTGCTGGCGTGCAGGAAAATCGGTTGAACCTGGGAGGTGGTTGAG10.5434782608695652No Hit
GTGTTCTAGTTCAGCATTGCTCCCGATAAAAGACAACTATTCAACAAGCT10.5434782608695652No Hit
TGCCAGTGTGGATTCACCAGGTCTAGGGGGCACCTGAGATTCTGTATCTC10.5434782608695652No Hit
GTTCTGTTCTGATGTGTTTCCAGGATTTGTTTCAAGATTTAGAGCTCCTT10.5434782608695652No Hit
GTTATTTAATTTATATTTTGATTCTTTAAGTTATAAGATTGTTATTAAAT10.5434782608695652No Hit
GAACAATATACTCATTTAGGGGTTGAAGTTTGAAAGGAAATCAGATGATG10.5434782608695652No Hit
CCTTTACCGAGTCCGATAGGTCAAGCTGTATGGGTTGAAGTGAGCTTGGA10.5434782608695652No Hit
CTGAATAGCTGTGTGATTTTGTATACATTCCTTACTCTCCTGGAACTGCC10.5434782608695652No Hit
GATATCTGATTCATTTCCAATTAATAAATGGTTATGATATGGGAAAAAAT10.5434782608695652No Hit
CCATTGCCTGGGCGATGCCGCGCGCCGCGAAGTCGCGCACCCCCTGCACC10.5434782608695652No Hit
ACCACATCTCCTCCCTCAGATGAAACTGAAATATTGGATAGAAGAAGAAT10.5434782608695652No Hit
AGCATGACCGGCGTGGGGGGGGATTGGGGGGGCGGGGGGCGGTACCGCGC10.5434782608695652No Hit
CTGTTTCACTCTTTAATAACTATTTTGCATGGCATCTTTTTGTCCCTTAA10.5434782608695652No Hit
TCTTTAGTGATGGCATCTGCAGTCTCTTTGGCCTTGTCTTTAAGGTCCTT10.5434782608695652No Hit
AGCTGAAGGTGAGCATATATTGGCCATCATTCTGAAAGCATATGGTTTGG10.5434782608695652No Hit
TATCAACGCAGAGTACATGGGAAGCCGTGGCTGTCTCTTATACACATCTG10.5434782608695652No Hit
ACATTCTCCCCGCCTGCAAGCTTGAGCGATTCAATAAACACAACAGCTGT10.5434782608695652No Hit
CGCCAGCCCCGAACGCTGGGCGCGCGCGGTGGCCGACGCGGCGCGAAGCT10.5434782608695652No Hit
GAATATCTTCAAGTAAAAACTAGACAGAAGCATTCTCAGAAACTTATATG10.5434782608695652No Hit
GCCCATTTATTAAACTGCAAGCCAGACAGCTCTGCCAGAAAGATCTGCAT10.5434782608695652No Hit
CACTTGATGATGGCTCCCAGTGAACGGAATATCGCGATGAACCCCGGCCC10.5434782608695652No Hit
AGCTAAGGCACAAGAATTTCTTAAACCCGGGAGGCGGAGGTTGCAGTCAG10.5434782608695652No Hit
CCGTGGAGGAGCGCAACGACCTGCCTTTCCGGTCCTCGGCAAGGGGCGAC10.5434782608695652No Hit
GTGTTGGAGTATGCAGAAATCGTTCAACGCACTGCAATTATTAGTCCATT10.5434782608695652No Hit
TGTAAAGGGTGTGTGTTTGAGTATCTGCGGAGGCTGCTATACCAAAGGAC10.5434782608695652No Hit
CAGGGACATGACGATGACGTTGTCGAGAAGGCCATGGCGACGACCGGGGT10.5434782608695652No Hit
GGCCAGTCTTGAACTCCTGGCCTCAAATGATCCTCCTCCCTTGGCCTCCC10.5434782608695652No Hit
GAAGAAAAAACGTGTCTGCAATTTTATAGTGATCCTTTTTCTTGTAAATT10.5434782608695652No Hit
ATGGGGAGGTGGTAATTCTCCCAGATGAAATATTAATGGGACTTCAACAA10.5434782608695652No Hit
ACTCTAGTCTGGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGA10.5434782608695652No Hit
GATTTATTCTGTTTGCTTAGCCTTGCTTTGTCTATGTGGGCTCTTTTGTG10.5434782608695652No Hit
GCTGAGATAAACCAATTGATGAAGACAGCATCTCACTGAATATTCCTTTA10.5434782608695652No Hit
GGCCTCGGGGAGACTCAAGCCAGATGCCAGCCACGGGGACCACAGCCTTG10.5434782608695652No Hit
CCCTTTCATCTCTTGCATAGTTTTACCCTCACCAAGCAAGACCTTCCCTG10.5434782608695652No Hit
CCATCACCTTCTTCTTCCTCCTCCTCTTCCTCCCCACCTTCTTCCTCTTC10.5434782608695652No Hit
GCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAG10.5434782608695652No Hit
TCACATACCACAGTAAAGTGTGAACAATGTGTCGTCGTGTGTGACACGAT10.5434782608695652No Hit
GCTCCTGGCTGGACAGTTGCTCCAGGGTCTGTTGTGCCACTTTCTTGCCT10.5434782608695652No Hit
GCCCCCGCTGCCGCACTCTCCTTTGTCGTACCACCATTTGTTTTTCAATT10.5434782608695652No Hit
TTCAGGGTCTGACAGCAAAGAATACACAGAGGAGGAGAGGAAAGCTTTGG10.5434782608695652No Hit
AGTGGATTTCCATATGTTCTGCCCTCATCCCATTCCTCCCTACAGGCGTT10.5434782608695652No Hit
GGTTTTGCCTTCTCATTTCCTACAGAGTAGGGAAGAGATCCCAAATATTG10.5434782608695652No Hit
GCGGTGGCCCGGCCCAGGTTCAACAGCAGCAGGGGCCGGCTCCCAGGCCG10.5434782608695652No Hit
NCAAGGCTTGTTCTTCGCGTCTGCGTTGTTCACTAAACATCTTCCTGTCC10.5434782608695652No Hit
GTGCTGGAGCAGGTTCTGCGGTCGCTCGGAGTCGAAAATGCGCCCACCGA10.5434782608695652No Hit
GTCGCCCTCCCGGGCGGGTGGCGCCGCCGCTGCCGGCCCCCAAGCCGGCC10.5434782608695652No Hit
GCTTAAAACAACAGAACTTTATTCTGTCACTGTTCTGGATGCTAGAAGTT10.5434782608695652No Hit
CCACGGCGTCGCCCGGTTGACCCCAGCCCCCGACAAGCCCGGCACGTACA10.5434782608695652No Hit
CTTTGTGAGCGCGTACCTCTACGGCCGCGTGCTCATCCGCAAGAATGGCT10.5434782608695652No Hit
GCCCTATGCCATCAATGGGAAGATCTCCCCCCAGAGCAACGTGGACTTTG10.5434782608695652No Hit
CTATTCGACCGCGGGCGCCGACCAGTACAACCAGCGCAACGCCGCCAAGG10.5434782608695652No Hit
CCGATGTGCTGGCGCAACAAGAGCCTTCGGATTTTGATTTCGACATACCC10.5434782608695652No Hit
ACAATAACCTTTCCGATGAGAGCCCTTTTGACAAAGCAGAGATGTCGGAG10.5434782608695652No Hit
CGAATGGGATCATCATCAAATGGAACTGAATGGGGTCATGATCAAAAGGA10.5434782608695652No Hit
CCTCATCATGCATCCGTGCGTTTTTTTATTTTTGGCAGACCTACCTGACA10.5434782608695652No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA10.5434782608695652No Hit
GGTGTGACCTGTCCGGAACATCCTTGTGATGCTCAGCAGGGCCTGCTGCA10.5434782608695652No Hit
TCCGCAAGCAGCTGCCTAAGGAGTCTGTCCTATTTGATCAAGTGCACACC10.5434782608695652No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTA10.5434782608695652No Hit
AGGTTGTTGTGAAGAATAAATGATCTATTGCATGTAAAGGCCTTAGTACA10.5434782608695652No Hit
GATGGAGCCTTGCTCTGTTGCCTAGACTGGAGTGCAGTGGCGCTGGTGTG10.5434782608695652No Hit
TTTTTTCATCTATACCTTCACCCATTTCTCACATCCCTAATTTGGTGGTG10.5434782608695652No Hit
AGGCGCGGTGGCTCATGCGTGGAATCCCAGCACTTTGGGAGGCCAAGGTA10.5434782608695652No Hit
GTAATGTATCAATAATCCCAGCCCAGTCAAAGCACCGCCACCTGTAGGCT10.5434782608695652No Hit
GCCTTCAGGTACTTGGCTGACAGGCTGCCAATGAATACCGGCTTGTAATA10.5434782608695652No Hit
GGGTTTTGCAAAGGCCAATTCCGCTGGGCTTGTAAGGTGCTTGCAGCTGA10.5434782608695652No Hit
AGATAGCAGGACTCTATGCTCTTTCCTCATTGTTCTGGTCAAATACATTT10.5434782608695652No Hit
NTCTATGACGATTCCATTCATTTCCATCTGATGATGATTCCATTCGATTC10.5434782608695652No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATG10.5434782608695652No Hit
AACCTGCAGAATATGTTTGGAAAGCCACTGATACAGGAGAAAAAAAGCCA10.5434782608695652No Hit
CCTTCCTGACTGCTTTGGCTTTGTTCTCTGCAATTTTCTTCCTAAATTCA10.5434782608695652No Hit
CAATAATACTAAGCTAGTATATGCCTAAAAGCCTTTGCCAATATTTTGTC10.5434782608695652No Hit
GATTGGAAGAGAAATTGGGGGTCCTGGGATGGTGAGTGTGGGCAAAGTTT10.5434782608695652No Hit
GAAGAATGCCCGGCAGAAGCAAAGCTTCAAGACCATTGCAGACGTCTTGA10.5434782608695652No Hit
GTTCTAAGTCGGCTGCTAGGCGGCGGCCGAGGCGAGGCGCCTAGCAGCCG10.5434782608695652No Hit
GTTTTGAATGTTTGCATCTATGTTTATCAATGATATTGGCCTGGAGTTTT10.5434782608695652No Hit
GTCACTAACTCCACTCCAGCCATCCAGGCCTTCCAGCTTTTCCTTTACTT10.5434782608695652No Hit
GTAGAACACCTGACCACCATTCCTCAAAACTGTCCCCGAAAACAAGACAG10.5434782608695652No Hit
GATATCTCTGCGGGAATGCCGCGGAACCGGCTTGCCGGGCCGCAGGCATT10.5434782608695652No Hit
GTTGCAGGAAGCACTAGAGACATGTGAAAACCTGAGAAGCTCTGTTGCTG10.5434782608695652No Hit
GCAGAACCCTGTAGCCAGAACTATAATGATAATTATAATGAAATAAGACC10.5434782608695652No Hit
TGCCCTGGATTTTTCCCTCAACCCCTTCCTCTCCGTTGTTTCCAAGCATC10.5434782608695652No Hit
GTGCAGGTCGAGTTCGCGCTTGAACAGGATCGGCAGGCCCTCCGCGGCCG10.5434782608695652No Hit
GGAAGAATCAATATCGTGAAAATGGCCATACTGCCGAAGGTAATTTACAG10.5434782608695652No Hit
GGAATTAATAGTACCTGGAGGTCAATAATCCAAATAGGAGATTGGCAAAC10.5434782608695652No Hit
GGGCGTGCATCCAGAAGACGCGGAAGATCACGAGGGCCGCGCCCAGGGAC10.5434782608695652No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)