FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTTCCATATGCTGTCATTCATCTTAAAGTATATATTGAGTATCTACTG27.4074074074074066No Hit
ATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTT27.4074074074074066No Hit
TTGCGACGGGTCCGAGACATTATACACTTATGTATTTGGGGTTTACCGTG27.4074074074074066No Hit
CTATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTC27.4074074074074066No Hit
GTGCAGCCCCACCGAGAACGGCTCGGCCAGTGCGGCCAGCCGCAGCGGCA27.4074074074074066No Hit
CTCATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAA13.7037037037037033No Hit
CTATAAAGGCAAAGTGAAGAAGCTCAAGAAAACATCTTCAAGTGACTATT13.7037037037037033No Hit
CTGCAGGCCCCACCCCAACCAGCACCAAGGCCTCTACTTGGTCTGGTCCC13.7037037037037033No Hit
ACATGGCACAGTATCTGTGTCACAGACGCACTCTTCACAAGGACAGGTCC13.7037037037037033No Hit
TACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCACCTGTCT13.7037037037037033No Hit
ATTCTCTGGTTCTTGAGTGTCATCTCATGATCACCACCTGTTACCCATCC13.7037037037037033No Hit
GCTCTGCTACGTCATCGTGCTCCACTCCAGCATCCATGAAGCTGGTCCAG13.7037037037037033No Hit
GTCTCAAGGGTCGTGTGTTTGAAGTGAGTCTTGCTGATTTGCAGAATGAT13.7037037037037033No Hit
CAATAATATGTACCCTTCCTTAACAGGGCTCTCATGAGGATCAAACACCA13.7037037037037033No Hit
CTTTTTACCTTAAGCTGACTTTTCATAACCTCAACAGTGATATTTTATGA13.7037037037037033No Hit
GGGTTTCACCATGTTGGCCAGGCTGATTTTGAACTCCTGACCTCGAGTGA13.7037037037037033No Hit
GTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAA13.7037037037037033No Hit
GAGTAGCCACAGTAGGCCCCCAGCTCCAGCAGCACGGAGGGCTGGTGCTC13.7037037037037033No Hit
GCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCCTTT13.7037037037037033No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCCCTCCAGAATCTCGGGTT13.7037037037037033No Hit
GGGGTACTGCGCGCCGGGCATGGAGTGCGTGAAGAGCCGCAAGAGGCGGA13.7037037037037033No Hit
GCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGGTTCCTTCCTTT13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)