FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003634612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG55.88235294117647No Hit
CACCCCTAGTGCAAGTAGATGCTGGATCAATGCCAGATCCCTTTGAAAAG22.3529411764705883No Hit
GGCGCAATCTTGGCTTACTGAAACCTCCGCCTCCAGGGTTCACGCCATTC22.3529411764705883No Hit
CATTCATGTTGTTGACAAAATTCATTTCCTTATGTCTGTATGATTGTGTA22.3529411764705883No Hit
GGCGTGAGCCACCGCAACTGGCCAGAGTTAAACCATTTTTACTTTTTTTT22.3529411764705883No Hit
TGCTTCGGGCGTGCGGCTTCGGTCAAATGGCGAAACCGCAGGGGCTTTCG11.1764705882352942No Hit
GGAGGTCGGCGCGCTGCTCGCGCTGACGGGCGTCCTCGACATGATCATGC11.1764705882352942No Hit
GGCGTGAGCCACCGCAACTGGCCAGAGTTAAACCCTTTTTACTTTTTTTT11.1764705882352942No Hit
GTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGAACA11.1764705882352942No Hit
ACGGAGGCCGCGTCACCATGAATAAAGGCGAGGGCGGTGGGGCCGACGAG11.1764705882352942No Hit
GCTCGAGCCAGTCGACGTGGTGGGTGATGCGCTCGTCATAATGGGCTTCG11.1764705882352942No Hit
GCCTTTGTGTGCTTATCGTCTAAATAGACATCCAGAGTCTGAAAAACAAC11.1764705882352942No Hit
GGCCAAGGCGACGGCTCGGTCACGGCGACGCTCGCCGACCAGGCCGGTGC11.1764705882352942No Hit
GGGTTGGGGTGTGGGACCCCATCGGCGACTACCGTCGGGCGCACGAGCTC11.1764705882352942No Hit
GGGGGGGGCGGGGGGTCGGGCTCGGCGACGCTCGCCGTGGGGGCCGGGGC11.1764705882352942No Hit
CGCACCATTGCACTCCAGCCTGGGCGACAGAGCAAGAGCAAGAGCAAGAC11.1764705882352942No Hit
ATTACAGGGGAATGGAATGGAATGGAATGCAATGGAATGGAATCATCCGT11.1764705882352942No Hit
TAGGCTCAGGTTCGGGTGCCGTTTCAGTTTTTCAACCGTCGTTCAAATAT11.1764705882352942No Hit
GATATTCCCGTTTCCAACGAAATCCTCAAACTATCCAAATATCAACTTGC11.1764705882352942No Hit
GGGGGGGGGGGGGGGGCGGGGGGGCGGCGGGGGGGGGGGGGCGTGGGGGG11.1764705882352942No Hit
CCAAACACAAATATAAAAGCAATTTACCAATTAGCTAGGAAAAAAAAAAT11.1764705882352942No Hit
GGCTCAAAAATGCCTCCAGGTGCCCAGGCTGGAGTGCAGTGGCAGGATCT11.1764705882352942No Hit
CCATCACACCATTCGCAATACCGGCGCTGCGGACGTGGCTCACCAGACGG11.1764705882352942No Hit
CCGTTTCCGGCCCGTTCGCCTCGCTGGCAACTCGACCAGCGTACACGGTC11.1764705882352942No Hit
GTTGAAAGCATTCTCCCTGAGAACTGGATCAAAGCAAGGACACCCACTTT11.1764705882352942No Hit
CTGGACCGGCTTGGTGAGCCCGATCCCGTGCCATTCAGGCGCGATCCGCC11.1764705882352942No Hit
GTCTCGATCTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGT11.1764705882352942No Hit
GTTATTCCACGACAACTTCTGGCCAGCCGAACGGGCGGAAGCGAAAAACC11.1764705882352942No Hit
GGGCTACCTGTACCTAGAAATAAGAAAAAGAAGCAGATCAGAAAAGTAGG11.1764705882352942No Hit
GGGGGGGGGGGGGGCGGGGGGGGCTGGGGGGGGGGGTGGGGGGGGCGGGG11.1764705882352942No Hit
GGTGTCACCTCTACCGCGATGATGCCTGCCGGGGTTTCCACGATGATGTC11.1764705882352942No Hit
CCATCGCCGCAGAACAACCGAGCAAGGAGCCCGCATGAACACGCGCCTAC11.1764705882352942No Hit
AGCTAGTTCTTTGCCGGACAGGAATAGTTAGAGTTCAGGCATATGATCTC11.1764705882352942No Hit
ACTTTGTGATGTGTGCGTTCAATTCACAGAGTATAACCTTTCTTTTTATG11.1764705882352942No Hit
GCGTGGACCTGCGCGGCGACAAGCGCTGCGATAACGAGCGTTTTCATCAT11.1764705882352942No Hit
GCTCGATGTCATTTCGAATATGAAGTACCTGTGTTTTTATTTTAATAAAG11.1764705882352942No Hit
GGGGTGGGGCGGGCTGCTGCGCGCGGGGGGCGTCGGCGGGGTGTCGACCC11.1764705882352942No Hit
CGCATGTATATTCCATGCCCATCAAAGATTAACTCCTCTTTCCCTCCCAA11.1764705882352942No Hit
GATATTCCCGTTTCCAACGAAATCCTCAAACTATCCAAATATCAAATTGC11.1764705882352942No Hit
TCGCTCTTCACCCTCTTCTCGATCAACGGCGAGCGTTGCACGGCGGGCTC11.1764705882352942No Hit
GTCTTTAATCACTTGTGAGTTGATTTTTGTATATGGTGAGAGATAGGAGT11.1764705882352942No Hit
GGGTGGGTGGGGGGGGGCACCCGGGGGCGGGGGGTCCCGGAGGCATGCTC11.1764705882352942No Hit
GGTGAGGAACCGGTTGATGTACCACCGGATGATGTCGGCCTCCTCAGCAT11.1764705882352942No Hit
GGCGCGAACCGGATCAGGACACGGAATTGCGGTCGGGCGACGTGGTGGTG11.1764705882352942No Hit
CCCGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACCACGCCCAGCT11.1764705882352942No Hit
ACTCTAGCCTGATCAGCAGAGCGAGTCTCCGTCTAAATAACAACAAAGAA11.1764705882352942No Hit
GTGCGTTGTCCGGGGACGCTGAACCCGTCGACGTGCCGCCACAACACGGC11.1764705882352942No Hit
CATTCTCACCACTTCTATTCAAAATAGTACTGGAAGCTCTAGTTACAGCA11.1764705882352942No Hit
CACGACGGTTTGAGTTCGGTCGTTTTGCTGCGAGAAATCGCTGTCTCTTA11.1764705882352942No Hit
CATATCTGTTGAGAATGTGGGTAGTGTTTATATGCCTATCCGTTGAAAAA11.1764705882352942No Hit
CATCTCGAAAGAGGGGAAGAAAGTGTCCCTAGTTACTTTCTCTTCCCAGT11.1764705882352942No Hit
ACGGAGGCCACGTCACCATGAATAAAGGCGAGGGCGGTGGGGCCGACGAG11.1764705882352942No Hit
GGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGG11.1764705882352942No Hit
CCTCTATGTCATTTCGAATATGAAGTACCTGTGTTTTTATTTTAATAAAG11.1764705882352942No Hit
CTCTTAGAAAACAACTGGACAGAAAGGAAGCAGAAATCAGCAATGAAGAT11.1764705882352942No Hit
CGACAGGTGCATGCCACCATGCCCAGCTCATTTTTGTATTTTTGATAGAG11.1764705882352942No Hit
ACATCCCAATGAAGCTTCTGAGAATGCTTCTGTCTAGAGTTTATATGAAG11.1764705882352942No Hit
CATCCCGTTTCCATCTTACTCCGATCTAGTGGATTAGTGTGAAGCAATGA11.1764705882352942No Hit
GGTTTGGTGGGATCACAGTACTTTTTGTGATGCTGGTCTGGAATAGAACA11.1764705882352942No Hit
GGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTG11.1764705882352942No Hit
GATCCGCCCGACTCGGCCTCCCAAAATGCTGGGATTACGGGTGTGAGCCA11.1764705882352942No Hit
AGCTAGTTCTTTGCCGGACTGGAATCGTTCGAGTTCAGGCATCGGATCTC11.1764705882352942No Hit
CGACCGCGAACTCCATCGGCAGCTGCTTCAAGACCTCGCGGGCGAAGCCA11.1764705882352942No Hit
TCACGGGAATCATTGGAGCCTGTGAGCCGGACGAAGGCGTCCTCAAGGGT11.1764705882352942No Hit
GGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGG11.1764705882352942No Hit
GGCGTGAGCCACCGCAACTGGCCAGAGTTACACCATTTTTACTTTTTTTT11.1764705882352942No Hit
CAGTGGGTGTGCTTCCCTTCCGTCGATCAGCGTAAGGAGTCGACCTTCGA11.1764705882352942No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGG11.1764705882352942No Hit
AGACGCACACCTCTTTACACCCAGAACCCCTTTCCCAGCTGCAGCCAGGG11.1764705882352942No Hit
AACCCGGAGAGAGTGGGCAATTTCAGATTGATTTATGAACTGGGAAAGTA11.1764705882352942No Hit
GGGCGGGTGCGGGTCTTAGGAAGTCATGTAAAACATGTCAGAGCAAGTTC11.1764705882352942No Hit
GGGGGGGGTTCGGTTTTATCGACACGCAGCTGCTGGGAGCGGTCGGTCTG11.1764705882352942No Hit
AATTACACATATAAGAAGTATCCCAAATAAGCAAATCCATGGAGACACAA11.1764705882352942No Hit
GGGGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCAACCTCAG11.1764705882352942No Hit
TCGACGCGGAGGATCACCATCTCGTGCAGCTCCTTCTGCGAAGCGTTCGT11.1764705882352942No Hit
GTCTTTATTCAATTTTGAGTTGATTTTTGTATATTGTGAGAGTTAGGAGT11.1764705882352942No Hit
GCTCGAGCCAGTCGACGAGGTTGGGGATGCGCTCGTCATAATGGGCTTCG11.1764705882352942No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)