FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCG313.043478260869565No Hit
GTACATGGGCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCAAATAT28.695652173913043No Hit
CTCCAGGTGGCCTGGCCCATGGACGTCATCACCACTGTGGGGTTTACTGC14.3478260869565215No Hit
GCCGTACACATAGTGCTTCTGCCACATGATAACGAGCGCGGTGAAACCGA14.3478260869565215No Hit
GAGCTGCACCGCATTATCAATGACCGGGAGATGAGGGACGCCATAATCCT14.3478260869565215No Hit
AAGTTGATGAGCTCTTTGAAGGCAGCAAAACTGTCTTCCTCCATTCCTCC14.3478260869565215No Hit
CCAGTAAATAGTTGCCACTGAGAAACTGACAGCCAGGAGTCTGTCAAGAA14.3478260869565215No Hit
GAGTAAATGCATGAGTAAATATCTTGAGTATCCCATAAACCTTAATGTTA14.3478260869565215No Hit
GTGGACAGGCGGAACAGCAGCTGGTGGACTGCGCCCAGGACTTCAATAAT14.3478260869565215No Hit
GCTTGAAGCTGATCTCCTCATCTTTAATGATGAACTGTCGCCAAGTCAGC14.3478260869565215No Hit
GTCCTGGCCAAGCCCAGATAGAAGTCAGGAAGGTGGCTGGAAACTGGTGG14.3478260869565215No Hit
GTCTACTGAGTAGCCTCCTCAGATTCATTGAACTAGGTCTGTCCCAATGT14.3478260869565215No Hit
ATTGTTACCAGAATAAAAAGTACAAGAAGACGTCCATATTGGGAAAAAGA14.3478260869565215No Hit
CCAGGTAACTAATTCGAATCTTAGAGAGTGGAACGGTGGGTATTTGACAA14.3478260869565215No Hit
CTACAAGAAAGTTTGCCTATCTGGGGCGCCTGGCTCACGAGGTTGGCTGG14.3478260869565215No Hit
GGGAAATAGAGGAAAAGAGCTAAGAGTTTGAAATCAGATGCTTCAGTGTT14.3478260869565215No Hit
GACCCTCCATGGCCACCAACCCGGGGAAGAACGGATAAAGAATGTCACAG14.3478260869565215No Hit
TATCAACGCAGAGTACATGGGACCGACGCGGAAGACTATAAGCCCCAGCG14.3478260869565215No Hit
TAACCATGCAGCACAGACCAATTAGCCAAATGCAAAATAAACTAGATTCT14.3478260869565215No Hit
GGTGTCGCTGGGCTGTCGGCCTGGACCTTGCAGCCGCAATGGATTCAAGT14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)