FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003634624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTAGTAGAGACAGGGTTTTGCTCTGTTGGCCAAGCTGGTCTCGAACTC313.043478260869565No Hit
AAGCTCTACACTGCCCTCTGGAAAGCCAAACCTCTTCTGAACTACAGCAG28.695652173913043No Hit
ACCTACTCCACAGGCCTCGTGCCTCCGTCGGAGCGCAGAGGCGGCACTTA14.3478260869565215No Hit
GCTGTGTTTCCCCCATCCCATCTGCTGGAAGTCAACAAGAGCATCTAGCA14.3478260869565215No Hit
ATCCTTGACAAAGCCGATGGCCTTTCCAGGTTGGAACTTGCAATAACCAT14.3478260869565215No Hit
GAGCTCCAGCCTTGCAGGGGCAGCCGGGGGATCAGGGCCACAGAGCAACA14.3478260869565215No Hit
GCACCACACAGTCCTCGATCTGAGGACACACCAATAAGGAGGTGTTTCTT14.3478260869565215No Hit
GCTGCACTACTAACTCCCCAGTGCTTTTGAGGCACGTGTTAGACATGTTC14.3478260869565215No Hit
GCTGTGCCGCTTGCTGGGCACAGAGCCTCTGGTAACTGCCCCCTGATACA14.3478260869565215No Hit
GAACAGCAGCGGTTCTGACGTCATGGTGAGTGACTGCCGAAGTAAGGAGC14.3478260869565215No Hit
GTCTTTATTGGGCTCAGACCAGGAGTCCGTGGGTCTTGAGGACCTCTGTG14.3478260869565215No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC14.3478260869565215No Hit
GTATCAACGCAGAGTACATGGGGCCGAACTTCCGGCTCTCACTGCTAGGG14.3478260869565215No Hit
GGTTAGATGATTAATTTCACCTCCTGCCCCTGAAAATTTCTAGGTTATCC14.3478260869565215No Hit
CTTCTATTGTTATGCCTCCAAAAAATCTGGTAGAGCTCTTTGGCAAACTG14.3478260869565215No Hit
ATCCCAAGAACACTCACATCGTCATCAGCTGGATGATCGCACAGACTGTC14.3478260869565215No Hit
CATGAAAGTGTTGTGAAGAGCGAAGACTTTTCGCTCCCAGCTTATATGGA14.3478260869565215No Hit
GTGCATTGACTGTTCCGGGGTGCACCGCTCCCTGGGCGTCCATCTGAGCT14.3478260869565215No Hit
GTACATGGGCTGTCGCCATGTTGTAAAACTCACACTTGCCAAAAGTTGTG14.3478260869565215No Hit
CGTAAATTATGGCTGAATCATCCGCTACCTTCACGCCAATGGCGCCTCAA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)