FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003634627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003634627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCTGTTCGGTGCCGAGTTGGCTTGCGCCAGCATCGCCGTACCCGCTTG46.451612903225806No Hit
CGTTTACATCGACCTGATCGGTTGTGCCGGGCACGTCTTCCGTCGTGATG46.451612903225806No Hit
CCTGTAAACGAAATCATGTTCACATCAGGGTGTGTGATAAGCGGATCACC34.838709677419355No Hit
GTCGGTGCGTCACATCACGGGCAAGCCGATCAAGTTCGTCGGTGTGGCCG23.225806451612903No Hit
GAACACAATTTCCTTTGCGCCCACCTTCAACAAACCTGCAGCCGTCTCAC23.225806451612903No Hit
ACGCCAAGCCATAGGCCGTCATGTACACCAGCACCGACGACACCGAACCC23.225806451612903No Hit
GCTCCGCCAGCGTTCATATTGATTGTCGGTTTGCGTCGCACGCGCCCAAC11.6129032258064515No Hit
GTTCCAAGGTTTTAAAATATTTGCTGTCAGACGGCAGTTGGTTTTGCCTG11.6129032258064515No Hit
CAGATGGAGCGGCTCGCGCAGCAGGGCGGTGCCGACTCGCCGTGGCAGGC11.6129032258064515No Hit
GGCTGCTGCTGTTTGCAGCGTATCCGCGCGCGTCCATCTCGATTGCCACG11.6129032258064515No Hit
GGTGCATGCCCGCCGCCCGCGCCTTCCGTGTGATACGTGTGGATCGTGCG11.6129032258064515No Hit
AGCACTTTGGGAGGCCGAGGAGGGCAGATCACGACGTCAAGATATCGAGA11.6129032258064515No Hit
GTTCAGCGGGTATTTGTACAGCAGGACATTTTTGAAGAGTTTACGGAGGC11.6129032258064515No Hit
ACGCCCGGCGTTGCCAGTTGAACATCTGCCACTGGCTCACCCAACATTTG11.6129032258064515No Hit
CCACTTGATGAAGACATCGCTGTGCAGCCAGATGGTGGCGCCGCCGAACA11.6129032258064515No Hit
CTTCGGCTACGCCCACCTCAACACGAAGGTCACGCGGAACGCGACCAACC11.6129032258064515No Hit
GGTGCATGCCCGCCGCCCGCGCCTTCCGTGTGATACGGGTGGATCGTGCG11.6129032258064515No Hit
CGCTGCGCCTCGACATGCCCGCCGGCGGCGGCACGCTCGTACCACTTGTT11.6129032258064515No Hit
TTCTAACGGGTGGCGCCGGCCTGCTTTTTTTGGTATTTGATCAGTATGGA11.6129032258064515No Hit
CCTCCAATGAAAACGACGATGCGGCAAGTGACAAATGTTCACACCGGGTC11.6129032258064515No Hit
CCGATGCGCCATGCATCATTGCGCGACAATAGATAACAGGCAACCGCATT11.6129032258064515No Hit
GTACAGTGCGGTGCAAGAGGGTGCGTTCCCTGCGTGACGCCTGAGCAATA11.6129032258064515No Hit
CATCCATGCAATGGAATATTATTCAGCCTTAAAAAGTGAGGAAATTCCAA11.6129032258064515No Hit
ATCCAGGCGTGGTACCGCGAGTGCGTGGCCGCCAATGGGCTGTCGTCGCG11.6129032258064515No Hit
GTTCCTGGGCCGGTCTCGTAGGACCCGGGCTTGCTGTCGATACCGACCGC11.6129032258064515No Hit
GTCGGAAGTCAGTCATTGTTGGCGATAAAGTGCGGCTTGACGGCGACGTG11.6129032258064515No Hit
GCTCCAGGCCGCCAACTACGAAGACGACATCGAAAAGCTGCGTGATTGCG11.6129032258064515No Hit
GTATGGTGTTTCTTGGGGTTGCCAGGAAACCGCTTAGTTTCCAGAAACTA11.6129032258064515No Hit
ACGTCTTTCCGCGTTAAGGAGTTTGAGTGAGTGCAAGATGCACTAAAGTG11.6129032258064515No Hit
GATCCAGGCCGCCAACTACGAAGACGACATCGAAAAGCTGCGTGATTGCG11.6129032258064515No Hit
ACACAGCGTCTGCTGCGCTGCTGGCACGCATTTCTGGTTTAAACGCTACA11.6129032258064515No Hit
CATGTGGGCTCTGTACGCAGATGCCTCCGACTACTCCTAATGGCAGACCG11.6129032258064515No Hit
CGTCGAGCGCATGCACCATGGCGCCCAGCCGCGCGAGCCCCGGGTTGTCA11.6129032258064515No Hit
CCGCCGTGATGGATTTGCAAAATCGCTTTTGCGCCTTGCTGTTGCAGGAT11.6129032258064515No Hit
GTGGCCGAGGTAGTGGAAACCAGCGCAGCACTGATGCGCGAATACATCAA11.6129032258064515No Hit
GCCTGACCGTGATGCTGATGCGCGTCAGCATGACCATGCCAGCGAGCACG11.6129032258064515No Hit
CGCTTGGCAGCGGCCTCGTCAAGTGCGGTGGCCGCTGCGTCGGCAGTGCG11.6129032258064515No Hit
GGACCCGGCCATGACGGCGGGCGTCCAGGTGTCGCGCGCCCACGGCAGAG11.6129032258064515No Hit
GTGTTGTAGAGGTGGGTTTTTTCTAAGCACAAGGACGGCAGGGTCCGGTC11.6129032258064515No Hit
CCTGTAAACGAACTCATGTTCACATCAGGGTGTGTGATAAGCGGATCACC11.6129032258064515No Hit
ACCGTCGATGCCGTGGGTCGCATCATCGGCCCGCGCCTGTCGCAGCAATT11.6129032258064515No Hit
GTGCACGTGAAGAAAGGCGAAGCGGAATCCAACGTCTCGCCCAAGAAGAG11.6129032258064515No Hit
GTCCGGCGAACCGATCAACGAGCACGCGATCGGCGAACCGGGCTCCACAA11.6129032258064515No Hit
GCAGAGGAACTGTGGTGAAGGGTGAGGCAGCAGTGGGAGAAGCAGAAGGG11.6129032258064515No Hit
GCGGGTCAGCCGTGCGGCGGCATGTCGAGGCGACATTGTCGGCGATTTTG11.6129032258064515No Hit
AGGTGATTGCACGCATTGCCGACGGGTCGGATTTCCTGGAGTTCAAGCGC11.6129032258064515No Hit
AGCGATGCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCA11.6129032258064515No Hit
CCCCAAGTGTGCGTGCGGTCAAAACCGAGCCGGATTCGTTGGACCACCAA11.6129032258064515No Hit
GCGTAATCATGACGGGGTTTTTTAAAAAAACCATGAAAAAAAGTGATGCA11.6129032258064515No Hit
GGCCGATGGCGATCAAGCTGATGTTCTTGAGCGAAGTTCGCATGTGTCGC11.6129032258064515No Hit
CCGCCCCATGCGTCCACCGTCACACGCTGCTCGGACGGATGCGCCGGCTC11.6129032258064515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)