FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003635067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCACCACCATACCCAGTTAATTTTTGTATTTTTAGTAGAGATGGGGTT33.571428571428571No Hit
CCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTT33.571428571428571No Hit
GATGCAGGCGAATCCGTCGCTGATCAAGCGCCCGGTGCTCGTGCACGGCA33.571428571428571No Hit
GCCCACACCTGCGACGCCGCCACGGTCGTGCCAGACTTCGCGACGCACAG33.571428571428571No Hit
ATCTCAGATCATCAGGCATTAGATTCTCATAAGGAGTGTGCAACCCAGGT33.571428571428571No Hit
TACGCAGGCTGCCCGGGCCATGGGCGGCAGCCGCGCGGGCTCTTAAAATT33.571428571428571No Hit
CCTTTCGGCATCCCATTCGATCAGAGGGTTGACTCAGCTTTGCGGCACAG33.571428571428571No Hit
CGTTCACGACGGCCGCGCTGTTCGCCGGCTTCTTCGCCATCGTGCAGGCG22.380952380952381No Hit
GCGCGCATGAGTGGCGCAAGAAGGGTGTCGAGATTCCCGCGCTCGGTGGT22.380952380952381No Hit
GTGTACTCGGAGGGCGCCAAGGCTGGCGACAGGTTCGATCCGTACACGCA22.380952380952381No Hit
ATCGGCGACATGCCGCTGCACCTGCAGGCCCGCCTGCTGCGCGCATTGCA22.380952380952381No Hit
AGTTTCAGTTTTCTGCATATGGCTAGCCAGTTTTCCCAGCACCATTTATT22.380952380952381No Hit
CAGCGCCACGCCCAGCAGGCCGTAGACGATCGACGGCACGGCGGCCAGAT22.380952380952381No Hit
GTGCCGGGCTTCGTCAGCAGCCGCAACATCCAGGGCTTGCTGCTGTCCGT22.380952380952381No Hit
GTACAGAATGGTGCCGATCTGCGAGATGATCGAACCGACCGGGCTCGGCG22.380952380952381No Hit
CTCTCAGCACCGTCATGGTCGCCTTGACGGCGTGCGGTGGTGGCGGCGAT22.380952380952381No Hit
AGACCGTGCAACAGCATCGTTGGCATGCCGGGATAGGCGGCCACGTTTAC22.380952380952381No Hit
CTCCTTGATCATGTCGACCAGGCCGTCGGCTTCCACGTATTCGGAATGGC22.380952380952381No Hit
CCGCGTCTGCGGCAACCAGAAGACGAATCCCGCGGGCGCGACCACGGTCG22.380952380952381No Hit
GATAGTAGATGCCGGCACTCACATCGCCCAAGCCCGCGGACGTCTTGTCT22.380952380952381No Hit
GAATTCAATCATCACCTTGCCAACCGGGTAGCGGAACTGACGCTCCATCA11.1904761904761905No Hit
CCACAGAAGGAAAGGCTGTACTACCGTCTTCGTCCTCTCTCCAGTCCTCC11.1904761904761905No Hit
GGTTCGGGGCACAGGTTACAGGTGGATTCAAAGATTTTCTGACGTTTGAT11.1904761904761905No Hit
CTCGCGTGCCGGTTGCAGCCAGCCGCGCTTCGTTACGCCTGGCATGTTGC11.1904761904761905No Hit
CCGCTAGACCGCGCCCGCATGGCTCGCGTGAAGCCCAGCAGCTCCAGCAG11.1904761904761905No Hit
CTGGCCGCACGCACCTGCGAGCGCATCACGGCCAACCGCTCCACACGCGA11.1904761904761905No Hit
GGTCCTGCCCGAGGTCTAGCCGATGACTCCCGTCCTGCTCATCCTGAATG11.1904761904761905No Hit
CAGGAACGCTTCCATGTCGGGGTAGCGCGCGATGGCCTGGTCGGTCACCG11.1904761904761905No Hit
CTGGTTGACGGCTTCTTCTTCAGCCCCGGCACGTCGCGCACGTCGTAGAA11.1904761904761905No Hit
ATGTAGCTCGTCGGGTACAGCATTTCCTGCATGCCGGGGCCGCCCTTCGG11.1904761904761905No Hit
CGCCTGCATAGCCCTTCGATGCCAGGAAGTACTGCGAGTTGTTGACCACG11.1904761904761905No Hit
GTCATCTCACTCATTCCTCGCCTCCGGCGTTGCGGCCGGTTGCGCGCGCG11.1904761904761905No Hit
GGTGTGAACAGGGAAAGCAGACCCACGATCAACCCGCCTAGTGCCAGTTG11.1904761904761905No Hit
GTCGCGCGACGCACTCAAGCCCTGCGCCTGCGCCTGCAGGCATCGCGGTT11.1904761904761905No Hit
GCTCAAAACTGCGCAGATACCGAGGTGCGCCTTGCGAGCAGCGAGCCAGT11.1904761904761905No Hit
GCCGAGACGATCGCCCCCGGCACCGTCGTCTCCTTCAGGATCGCCAGCTT11.1904761904761905No Hit
GACGACGACATTCCGTTCTGACCGGCCGGCCGCTGGCCGTTCACCGATTG11.1904761904761905No Hit
CGACAAGCCGCAGCACAGCAATCTGCGCAGGATCTGCAATTGCCCGATCC11.1904761904761905No Hit
GCCTTCGATCGACTGGAAGCCGCCCAACATCTGCGCCAGGTACGTCGCCG11.1904761904761905No Hit
TGGGGGAGCCTTCCCGAGACTGAAATCCGTCTTGCCGCCGATGCGCAATG11.1904761904761905No Hit
CGTAGAAGTTGCCGAGCTGCGAAGCGGCCACGAGGGCGGCGACAAGCCAG11.1904761904761905No Hit
TGGCCAATCTGGAAGCCTACGTCGATGAGCAGCTGCGCGTCGCCGAGGGC11.1904761904761905No Hit
TGCTTGCTGCGGCAGCCATGATGGTGAGCGCCGCGCCGGCACATGCCGAC11.1904761904761905No Hit
GGCTTGCTCACCCGGTTTGTAGGGGCGCAACTCGTCGGTGAAGACCACCT11.1904761904761905No Hit
ATACTCGAAGGCTGCACGTCATTCAGGTGCGTACTCGCACTTGCCACCCT11.1904761904761905No Hit
CCGCAAAAACCGTTGCTGTAGTTTGCTTGATGACATTCGTTTTTACGATA11.1904761904761905No Hit
GGTGCAATTCCGCGTCGATAAGGCCGGTATTATCCACGCCACCATCGGCC11.1904761904761905No Hit
GCATTGACGGCATCGAGCGCGGCAAAGACGCCGAGCTTGAGGTAGTCATC11.1904761904761905No Hit
CTCATTTTCAGCGCCTGCATGGAGCTGGATCTGGGCGGCATGCAGCCCTT11.1904761904761905No Hit
GTGCGACACGCCGATCTCGTCCGACACCGCAATCCGCTGCGACCGCCGCC11.1904761904761905No Hit
ACTCTGCGCCTCTGGCATTTTCGTTGTCTATCATGTATCCGACAACTGTC11.1904761904761905No Hit
GGGCTCCACTGCCAGGCCGACTTCACCTCCAGCGCCGAACGCCAGTTGTT11.1904761904761905No Hit
ATGGTGGCAATGGCCACACCGGGGTCAAAAGGCGGTACGCGGTCTTGCAG11.1904761904761905No Hit
GCACCTCACCCGCCACCACCGCAAACCCCCGGCCCTGTTCGCCTGCGCGC11.1904761904761905No Hit
GCTCTAGTCAGCCATGTGCAAACAGAGTCATCGGACACTCACCATCAAGC11.1904761904761905No Hit
ATTCGGGCAAGCGGGAATACCAAAGAAGAATAGCAGATACATTATTACTG11.1904761904761905No Hit
GTTCCGCACCGAGAAATACAACGAGCGCACGACGGACTCAGACTTCGCCG11.1904761904761905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)