FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003635113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTGTGTGTAAGTGGACATTTGGAGCGCTTTCCGGCCTAAGGTGAAAAA32.912621359223301No Hit
GTTTTTTTCACAATTGAATTGCTGCATTTCTCAAACTTTGGGATCTATGA32.912621359223301No Hit
GATTTAGGAGATCTCAGGCTGTTGGAGAAGTTGCTCGTCAACCTTGATCA21.9417475728155338No Hit
GTCTAGGCACCAGGGATACATGCAGGAATGAAACCGACACAATCTGTTAC21.9417475728155338No Hit
GGGCGAGTGTTATACCTGGCTGCGTGTGCAGCTGAGGAGGGAGTGAACCT21.9417475728155338No Hit
GCCCAAATGATTTCGATGGGCCCGGTCTACGATCTGGATCAGGCCATGCT21.9417475728155338No Hit
GGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGC21.9417475728155338No Hit
TCGGTGGCCTACCCGATGGGAACCGCCGACGATTTGCGGCAGACAACAGC21.9417475728155338No Hit
TGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCG21.9417475728155338No Hit
GCTGAGGAGGTAGGTGCCGTCGAGGCCGGCCGTCAGCTTGCCGCCGAACA21.9417475728155338No Hit
CCTTCCAGCAGCTTCCTGTAGGTGGCAATCTCAATGTCAAGGGCCATCTT21.9417475728155338No Hit
GTTATGGATGGTGCTATTCGCGACATCACCGCCATCACCGGTCAGAAGCC21.9417475728155338No Hit
GTCTCACCCTTCACGACTGTCGCATCATCGCCTCGGTACACTGCGCACCA21.9417475728155338No Hit
GTTGATAGGCTATTAATTATTGCCTCAATTTCAGAACTTGTTATTGGTCT21.9417475728155338No Hit
ATGTACCTCTGTCACTTTATCTTTGGTTTTCCTGATACATTCAATGTTGG21.9417475728155338No Hit
AGCTAGAACACATAGAAGTCAAGTTTGCCTCCGAAGCAGAAGATAAAATC21.9417475728155338No Hit
ATATGAAGGTATTTGCATTTCTCCTGTTAATGAAGGGATTAAGTTCATAA21.9417475728155338No Hit
GGCTCGCCTCGCGGCGGACCGCCCGCCCGCTCCCAAGATCCAACTACGAG21.9417475728155338No Hit
GAGTACTTTTTTTTTTTTCGATTACAGAACAGGCTCCTCTAGAGGGATAT10.9708737864077669No Hit
TCCACGATACTCCTACTCCGATGCACCACACTGGAAGTGACGAGCTCAGA10.9708737864077669No Hit
CACAGACTGTCACTGCTGTTGCCGGGTTGACTTCCTATCCATTTGACACT10.9708737864077669No Hit
GATGTGGGTGTGGAATGGACGCGCATTCGCCCCGCCGTGGATCGTCTGCA10.9708737864077669No Hit
CCCAAACATTAATCAGTTCTTCAAATATCTACTCATTTTCCTAATTACCA10.9708737864077669No Hit
CCTCGAACTCGCGATCGTCCACAACACGAGTCGTCTCGGAGTCAGGACGG10.9708737864077669No Hit
CGCTTGTGGCAAGGGTTTGTAGGTAGAGTTGGAGGCGCGCAGAATGCGGA10.9708737864077669No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTAACTTTTATGGTCAGA10.9708737864077669No Hit
CCCCAATACTATACTGCTATTTCTCTTTTAAAAACAAGCAGAATCCCAGC10.9708737864077669No Hit
TTAAAGGAGTCCTCCCAATCTATTGAAGTCTTAAACTTTATGTTCTGGAA10.9708737864077669No Hit
TCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGT10.9708737864077669No Hit
TTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCT10.9708737864077669No Hit
ATTTGTTTGGCCTAAGTCACAGCTTCATGGCTGAAAATGGAAATAATAGC10.9708737864077669No Hit
GTTATTAGATTACCTTTCAAAATTAGTTACTGTGGTTATTATTTTATGGA10.9708737864077669No Hit
TTTCGATACTGAGATAGAAGCAAGGCTCATAGACATAGAATGACCCGGGT10.9708737864077669No Hit
ACTGAATGCTCTCAAAAGACACCTGCAGCGTGCTGAGATCCAGCAGAATC10.9708737864077669No Hit
TGTCTGTTGTGTGTGTGCCTCAAGCCCTGTTTTCCTGTGAAGATACTTTG10.9708737864077669No Hit
GGATTTGTCTGGAGTCGAAGGCCTTGACGTCGGTCAGAGTGACTGCCAGT10.9708737864077669No Hit
GACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAG10.9708737864077669No Hit
TGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAAGGATTTAAAG10.9708737864077669No Hit
GTTGGCACCTTTACCTCTGGACAACAATATTCCCTTTATGGATCCATTAA10.9708737864077669No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC10.9708737864077669No Hit
GTCTTCGACCATCGAACGCTCAGTTGTCAGCGTCTCCGTCGAGGTGGCAA10.9708737864077669No Hit
ACGCAGAGTACATGGGGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAG10.9708737864077669No Hit
AACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGC10.9708737864077669No Hit
ATGGATTAGTTCCCATGAGAGTGAGTTCTTATAAAGCCTGGATGCCCCTT10.9708737864077669No Hit
GCCGGCTGGTGGTGGCGAGTGTTGTCGACCATCATCGACGCCGTTCTGGT10.9708737864077669No Hit
GGTGAATACTTCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTAT10.9708737864077669No Hit
ATAGGGAGGGGCAGGCCCTTTCCTGCTGTCTGTCTCCCATAGTCTCTGGC10.9708737864077669No Hit
CGTGATAAAAATTAAATAGGGGAACAGTGATAATATCTGTCAAACACTGC10.9708737864077669No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTCACTTTTAGGTTAAG10.9708737864077669No Hit
GGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTC10.9708737864077669No Hit
ATCGTCGGCGACGCCCGGAACATCCTCGCCAAGCTCGTCGAGGAGTACTC10.9708737864077669No Hit
AGGTGACCTCGCGGAAGATTCCTGACATTCTCCACATGTCTTGGTCTTCG10.9708737864077669No Hit
CCGGTCCGCACCCTGCTGTCGCGGCACTTCTTTACCGGTTCGATGTGCAA10.9708737864077669No Hit
GTACGAGAGGAACCGCAGGTTCAGACATTTGGTGTATGTGCTTGGCTGAG10.9708737864077669No Hit
CACCACGCCTGGCTAATTGTTCTATTTTTAGTACAGACGGGGTTTCATCA10.9708737864077669No Hit
ACTCAAATGTAATCATCAAATGGACTCAAAAGGAATCATCATCAAGTGGA10.9708737864077669No Hit
GCCCACTTCCATCCTCTCTGGTGTCAGACTGTGGTTGAGCTGAGACAGAC10.9708737864077669No Hit
AACCTCCAGCCCGAGGTGAGGAAGCCGATGCCCTTGGCGCCCCGGCCCTT10.9708737864077669No Hit
GATACGCGACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGGACAA10.9708737864077669No Hit
GATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGCTCGGGG10.9708737864077669No Hit
CTTTGTTATAAATCATTGTAATTTTTCTTGAGCTTGTTTGCATTTGAAGT10.9708737864077669No Hit
GCCGCGAGGCGAGCCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCC10.9708737864077669No Hit
GAGGAAATTAAAATGGACTTGGACATGTCTTTAGTTTGATGCATAAATTT10.9708737864077669No Hit
GCAATGTGCTTATCTATAAAGTCGTCTGCACACTTCTTTGGCATGTTATC10.9708737864077669No Hit
GTTTTAAGACACACCACCAGAAGCCCGTAAGATGAAAAGAAAAGGCTTCT10.9708737864077669No Hit
TTCGTGTAGTTTGTAGTCAGTAGTGTTTACAAGGGACCTGTTGCCATTGT10.9708737864077669No Hit
CGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACG10.9708737864077669No Hit
TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTG10.9708737864077669No Hit
GTCCACTAGGAAAGACTTGATTATCTTCCAAAATTGTCTGCAAATAAAGG10.9708737864077669No Hit
GCCGAGGTGATCTCCTTGTCATTGAACTCGGCGACGCCGCGGGCCTGGCC10.9708737864077669No Hit
GTACCCCGTCGAGGTCCCCGGCGTCTCGGTGTCCAACTTCCTGCGCACCG10.9708737864077669No Hit
CAAAAAGTACATTCTCTACCTTGTGGGACGCCGAAATCATGCACATTTAG10.9708737864077669No Hit
CTCGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGAT10.9708737864077669No Hit
GTTGGCACCTTTACCTCTGGACAACATTCTTCCCTTTATTGATCACTTAA10.9708737864077669No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC10.9708737864077669No Hit
CAGCTGGGGTTGTGACCTCGGTGGCCTTCATGCTCACTCTCCCGATCCTC10.9708737864077669No Hit
CGGGTTGGTTTTGATCTGATAAATGCACGCATCCCCCCCGCGAAGGGGGT10.9708737864077669No Hit
GAATAATGTTTTTGTCTTTTGTAATCCCAGCACTTTGGGAGGCAAGGCGG10.9708737864077669No Hit
GCTTTAGATAATTCTTCATCTTCAGCATCAGGCTCCCCGAAGCATCCTTC10.9708737864077669No Hit
GGAATGAAAATTGCCGTCGTCGCCATGGGCAAGATCGGGCTTCCCCTGGC10.9708737864077669No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC10.9708737864077669No Hit
GAGATACAGAGAGCTATGAACCCGCCCGCACCATTGAGAGGGGCGAGTGC10.9708737864077669No Hit
GCTTCTAGCCGTCCATTTCCCAACATTTTGATTACCTGAGCATACTCCTG10.9708737864077669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)