FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCGGTGTGAAGTGCAGTGCCGCGGTCGGCGCTGCGACCGCACCCGGCT321.428571428571427No Hit
CCGACTCGACAACCGAGTCACTATGGCGCCTCTTACGCGCCTCCGCTCCA214.285714285714285No Hit
GGGTAGGTGAGCGTATTGGTCATGCCCTGGCGCACGCTAATGCGCTGCAC214.285714285714285No Hit
CTCGCCATGAGCGTCTTCGGCCACTCCTACGGCACCTACGTGTCGGGCGA17.142857142857142No Hit
AGCGGGCAGGCCCATCGTCGCGGCGAGGATCGCGACGTGCGAGGTCGGCC17.142857142857142No Hit
TCGAAATGATGCTCAAGGCCACCGATGCCTTCCCCATGAATTTCGGCTTC17.142857142857142No Hit
CTGCTGCGTGCCTATGCGCCGTATCTCTCGAAGAATTTCGACCAGACCAA17.142857142857142No Hit
CGAGGCGGTCGGTGAGCTCGCCGGAGTCGATGAGCGTGATGAGCTCGGCG17.142857142857142No Hit
CCTCGGCCTATGCTCTTCGAAACTCGATTGCTCACGGCGGGGACGACAAT17.142857142857142No Hit
AAGCCACTCCAGCCCTCGTCGACGAACCTCTCCAACACCTCGATAGCCAG17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)