FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATGGGCCCGCAGCTCGGCCAGGCTCAGGCGGTGGATCCAGGCGTGGCG214.285714285714285No Hit
CAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCA214.285714285714285No Hit
GTCTAAAAACAAGGAATCACCCAAGTAAGATACTCCTTCAGAGCACTGCT214.285714285714285No Hit
NAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCA17.142857142857142No Hit
TTTTCTCACTGATATTCACATCGATTACAACTGCCTCATCACTGTCGATG17.142857142857142No Hit
GATGAGAAATCAGAAATGGGACTGAGCCAGTATCTACAGGGGCTGTCTCT17.142857142857142No Hit
GTTCTCCGAGCCGCCGCCCTTGGCCGCGACCTGCACGTCGAGCTTGTCGC17.142857142857142No Hit
GCATAGGGACTGACGTACTGCGCATCAACATAAAGATGCATGGCTGTCTC17.142857142857142No Hit
GCAATAGCAGCATTCTTCTTCCCTCTATTTTCAATAATTCCAGCTCAAGC17.142857142857142No Hit
GGCTAAAGTTTGCAACCTGATACGACGGCTTGCGGGCGAGAAGGTCGGTG17.142857142857142No Hit
TTGCAGCCTCGAGCTACAAAGCTCGGCAGAGTGGCTGGAAGTTGGCGGGC17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)