FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003635347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003635347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCATTCCTTCTCCGCCGCCGGCAGTCAGGTCGTGCCACCACTGGACG28.695652173913043No Hit
GTCCTCGAGCTTCACCGCCAGGGCGACCGCCAGCATCACCGGGAGCAGGA28.695652173913043No Hit
CGGCCCACCCGGTGGGGGCCAGCGCGATCGGCAGGACGAAGAACGTCCGG28.695652173913043No Hit
ACACCGTCCATCCGCGGCATCCGGATGTCCATGAGCACGACGTCGGGGCG14.3478260869565215No Hit
TCTGCGGGGTGTCGGTCCGCTCGTCGTCCCGACGCGGGAAGAGCCCTTCA14.3478260869565215No Hit
CCTCGTGGCCCTGCTGGGCGGCGTGGGGGTGGGGATCTACCTCATCGCCT14.3478260869565215No Hit
CCCCGATCCCGTGCCGGCCGTAGGCGGGCAGGTGTGCCGACGCGGCGATC14.3478260869565215No Hit
CTCATCGACGCGGTGTCCAGCCTGCGGCAGCAGCGCGGCCAGCTGGCGCT14.3478260869565215No Hit
CCGTGAGCACCACGCGCCCGACCCCCGCGAGGGGCAGGGCGGTCAGGACG14.3478260869565215No Hit
GAGATTAGCCTGTGGCGCAATGGCCTAAACAGCGTCGAAGATTTACAGGC14.3478260869565215No Hit
CATCCCCTACCCACCCGCCGGCCATGACCACGGCCGGGGCCAGGCCGCTC14.3478260869565215No Hit
GCCCTCCTCCAGCTGTGGGAAGGTCTCGTCGGCCCGCTCGGTGGCTCCCT14.3478260869565215No Hit
CGTGCACGCAGGAGTAGTCGAACTCGATCCCCTGCCCGATCCGATTGGGA14.3478260869565215No Hit
AACCAGCAGGTCAGCGACTTATCCAACTCTCAAGCCTCACGAAGTGGCCG14.3478260869565215No Hit
ATCATGAGGTGGGCGATGCGCCCCGCGAGCGAGCCGCGCGCCGAGCCGGG14.3478260869565215No Hit
CCCGTGCAGGGTCGACAGGGTGCGGGTCCAGCCGAGGTAGGGGTTGCTGT14.3478260869565215No Hit
CCGCTGACCGAGAGCGACTCCTCGACCTGGGAGTGCAGCCCGGCGAGCGC14.3478260869565215No Hit
GAAGTAGCCGGCGAACATGGCGAAGACGACGGTGCCGAAGACGACGTAGT14.3478260869565215No Hit
CCCCAGACCCCGAAGGAGATCTTTATGGGCGTCAGGGGCCTGGGGGCGAT14.3478260869565215No Hit
ACCCAGCGTCGTCGCGCGGAAGCGGTCGGCGACGGCCGCGACCAGGTCCG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)